Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 RN7SKP124-201ENST00000364730 341 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AL133388.1-201ENST00000404509 287 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 RN7SKP16-201ENST00000410180 299 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 MTCYBP21-201ENST00000443300 1113 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 RPL7P31-201ENST00000450192 724 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AL935212.3-201ENST00000450729 284 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC079168.1-201ENST00000458741 345 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AL591473.1-201ENST00000464297 313 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC022882.1-201ENST00000532142 501 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC006349.1-201ENST00000555526 235 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC233280.2-201ENST00000603917 1070 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC005252.1-201ENST00000604518 1063 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC104695.2-201ENST00000605056 775 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC010245.2-201ENST00000606908 1167 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 AP006248.2-201ENST00000623309 592 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 AL163152.1-201ENST00000642001 374 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 HSPA8P19-201ENST00000505359 1517 ntBASIC4.72□□□□□ -1.65
PTP4A1Q93096 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTP4A1Q93096 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
PTP4A1Q93096 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PTP4A1Q93096 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTP4A1Q93096 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 MIR323A-201ENST00000362199 86 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 RPL30P3-201ENST00000424262 333 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 DYNLL1P7-201ENST00000429273 258 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 CLUHP1-201ENST00000435012 1190 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 CYCSP24-201ENST00000445119 316 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 SETP20-201ENST00000457046 852 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 RN7SL717P-201ENST00000478343 297 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC011037.1-201ENST00000483964 558 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 RN7SL466P-201ENST00000497546 295 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC104109.1-201ENST00000498563 436 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 COX6B1P6-201ENST00000522347 255 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC027544.3-201ENST00000535082 757 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AL589674.2-201ENST00000604304 337 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 AC073869.10-201ENST00000642016 354 ntBASIC4.71□□□□□ -1.66
PTP4A1Q93096 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.71□□□□□ -1.66
PTP4A1Q93096 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms