Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 IRF5P1-201ENST00000504852 2164 ntBASIC3.94□□□□□ -1.78
RTN4IP1Q8WWV3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN4IP1Q8WWV3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN4IP1Q8WWV3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTN4IP1Q8WWV3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RTN4IP1Q8WWV3 INTS6P1-201ENST00000504674 2530 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 SMG1P6-201ENST00000532337 2930 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 MIR105-2-201ENST00000385083 81 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 HMGB3P7-201ENST00000400214 611 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 RPL12P43-201ENST00000420608 499 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 RPL7P57-201ENST00000423238 740 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 ATP5G1P3-201ENST00000463301 410 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 RNA5SP392-201ENST00000516905 112 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC093249.4-201ENST00000564755 259 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC015912.2-201ENST00000571053 181 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC027455.1-201ENST00000574104 594 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 HMGB2P1-201ENST00000591146 634 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC020910.3-201ENST00000603701 874 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC087283.1-201ENST00000604029 1074 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RTN4IP1Q8WWV3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 TLK1P1-201ENST00000456760 2440 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 RNU1-94P-201ENST00000362627 173 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL672167.2-201ENST00000377164 879 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL589647.1-201ENST00000402485 466 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC114755.2-201ENST00000413520 361 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL355994.1-201ENST00000424379 260 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 RBMY2TP-201ENST00000451162 947 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC234781.3-201ENST00000452540 973 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC012158.1-204ENST00000483430 465 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC004453.1-201ENST00000487895 408 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 GAPDHP56-201ENST00000506031 988 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC008033.2-201ENST00000542626 177 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 MTND2P17-201ENST00000550281 688 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC011270.1-201ENST00000558606 583 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC209154.1-201ENST00000582156 337 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 QTRT1P1-201ENST00000604344 1078 ntBASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RTN4IP1Q8WWV3 AL355852.1-201ENST00000454081 1771 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms