Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCS1Q01581 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCS1Q01581 MAPK10-303ENST00000641324 3959 ntBASIC4.5□□□□□ -1.69
HMGCS1Q01581 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCS1Q01581 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCS1Q01581 AL355852.1-201ENST00000454081 1771 ntBASIC4.5□□□□□ -1.69
HMGCS1Q01581 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HMGCS1Q01581 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCS1Q01581 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC007382.1-201ENST00000624376 2618 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU4-44P-201ENST00000363050 141 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU6-729P-201ENST00000384399 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU6-1320P-201ENST00000390838 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU6-1269P-201ENST00000391139 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AL591848.1-201ENST00000413092 322 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC106901.1-201ENST00000425086 698 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AL356390.1-201ENST00000455684 397 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU6-599P-201ENST00000459383 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU6-1193P-201ENST00000459461 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC090142.1-201ENST00000465776 462 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 TRBV8-1-201ENST00000481590 279 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 RN7SKP34-201ENST00000516142 244 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 MIR3934-201ENST00000579806 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 MIR4436B2-201ENST00000581415 91 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 MIR4436B1-201ENST00000583272 91 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 AL158062.1-201ENST00000619632 745 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 AL445528.2-201ENST00000620582 470 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU6-368P-201ENST00000620928 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 RNU6-538P-201ENST00000622329 107 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCS1Q01581 CUL4AP1-201ENST00000514750 1863 ntBASIC4.49□□□□□ -1.69
HMGCS1Q01581 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HMGCS1Q01581 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS1Q01581 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS1Q01581 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS1Q01581 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS1Q01581 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS1Q01581 RN7SKP149-201ENST00000363008 344 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 RSU1P3-201ENST00000412878 835 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC004074.1-201ENST00000421810 1063 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 AL355994.1-201ENST00000424379 260 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 RPL21P43-201ENST00000425440 472 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 AL645937.3-201ENST00000453647 936 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 RPS3AP41-201ENST00000462701 778 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 RPL5P16-201ENST00000471467 790 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 SCARNA22-201ENST00000503991 125 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS1Q01581 OR5D15P-201ENST00000531671 942 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AP001880.2-201ENST00000538233 448 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 DUX4L52-201ENST00000549363 777 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC009117.1-201ENST00000563948 554 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 BGLT3-201ENST00000564523 994 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC234775.3-201ENST00000564612 656 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 MIR4443-201ENST00000585052 53 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms