Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.22□□□□□ -1.73
H3F3AP84243 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.22□□□□□ -1.73
H3F3AP84243 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.22□□□□□ -1.73
H3F3AP84243 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.22□□□□□ -1.73
H3F3AP84243 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.22□□□□□ -1.73
H3F3AP84243 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.22□□□□□ -1.73
H3F3AP84243 AL110118.1-201ENST00000553543 400 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 MIR4480-201ENST00000582492 71 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.22□□□□□ -1.73
H3F3AP84243 AL137072.1-201ENST00000603444 466 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.22□□□□□ -1.73
H3F3AP84243 OR7M1P-201ENST00000608946 533 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 MIR6730-201ENST00000622213 67 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 AC091953.3-201ENST00000623220 236 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.22□□□□□ -1.73
H3F3AP84243 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.22□□□□□ -1.73
H3F3AP84243 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
H3F3AP84243 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.22□□□□□ -1.73
H3F3AP84243 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
H3F3AP84243 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.22□□□□□ -1.73
H3F3AP84243 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
H3F3AP84243 AL031119.1-201ENST00000404707 1879 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 AC097461.1-201ENST00000568928 2821 ntBASIC4.22□□□□□ -1.73
H3F3AP84243 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
H3F3AP84243 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
H3F3AP84243 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 AL672167.2-201ENST00000377164 879 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 RNU6-1320P-201ENST00000390838 107 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 RNU6-1269P-201ENST00000391139 107 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AL592291.1-201ENST00000403830 352 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AL591848.1-201ENST00000413092 322 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.21□□□□□ -1.74
H3F3AP84243 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.21□□□□□ -1.74
H3F3AP84243 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
H3F3AP84243 AL360081.1-201ENST00000428299 555 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AC097523.2-201ENST00000435551 652 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 TMX2P1-201ENST00000436507 708 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 RPL36AP15-201ENST00000444514 266 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 H2AFZP5-201ENST00000446960 382 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.21□□□□□ -1.74
H3F3AP84243 AC108463.1-201ENST00000450258 347 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.21□□□□□ -1.74
H3F3AP84243 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.21□□□□□ -1.74
H3F3AP84243 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.21□□□□□ -1.74
H3F3AP84243 RNU6-599P-201ENST00000459383 107 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 RNU6-1193P-201ENST00000459461 107 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 RPL35AP28-201ENST00000459730 331 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 IGLV2-34-201ENST00000490007 283 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 OR7H2P-201ENST00000513483 306 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
H3F3AP84243 AC107918.3-201ENST00000533272 382 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AC008147.3-201ENST00000548666 354 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.21□□□□□ -1.74
H3F3AP84243 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.21□□□□□ -1.74
H3F3AP84243 MIR6853-201ENST00000619642 74 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 RNU6-368P-201ENST00000620928 107 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 RNU6-538P-201ENST00000622329 107 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 AP003499.2-201ENST00000624100 483 ntBASIC4.21□□□□□ -1.74
H3F3AP84243 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.21□□□□□ -1.74
H3F3AP84243 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
H3F3AP84243 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
H3F3AP84243 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3F3AP84243 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.2□□□□□ -1.74
H3F3AP84243 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H3F3AP84243 AL035419.1-201ENST00000397037 564 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 RN7SKP267-201ENST00000410381 285 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.2□□□□□ -1.74
H3F3AP84243 CYCSP10-201ENST00000417973 294 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC140479.3-201ENST00000418944 1126 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 FABP7P1-201ENST00000424004 391 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 GTF2IP2-201ENST00000424290 697 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 RPS26P4-201ENST00000431743 355 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.2□□□□□ -1.74
H3F3AP84243 AL049745.1-201ENST00000433953 286 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AL359265.2-201ENST00000434367 631 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms