Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.19□□□□□ -1.58
LIMK1P53667 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIMK1P53667 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIMK1P53667 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.19□□□□□ -1.58
LIMK1P53667 AC073136.1-201ENST00000449426 2884 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.18□□□□□ -1.58
LIMK1P53667 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.18□□□□□ -1.58
LIMK1P53667 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
LIMK1P53667 AC091046.3-201ENST00000631455 1574 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LIMK1P53667 AC011155.1-201ENST00000316512 456 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LIMK1P53667 RPS3AP23-201ENST00000401762 784 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.18□□□□□ -1.58
LIMK1P53667 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 AL357520.1-201ENST00000441557 453 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.18□□□□□ -1.58
LIMK1P53667 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.18□□□□□ -1.58
LIMK1P53667 AC239367.2-201ENST00000447309 705 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.18□□□□□ -1.58
LIMK1P53667 ENPP7P11-201ENST00000505915 627 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 BTG4P1-201ENST00000510421 183 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 AF186190.1-201ENST00000517470 480 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.18□□□□□ -1.58
LIMK1P53667 NPM1P6-201ENST00000521088 871 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
LIMK1P53667 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 AC018552.3-201ENST00000567416 561 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 AC091042.1-201ENST00000579213 173 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 DHFRP1-201ENST00000579682 559 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 AC090948.2-201ENST00000607363 564 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.18□□□□□ -1.58
LIMK1P53667 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.18□□□□□ -1.58
LIMK1P53667 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.18□□□□□ -1.58
LIMK1P53667 AC020656.2-201ENST00000613291 5309 ntBASIC5.18□□□□□ -1.58
LIMK1P53667 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
LIMK1P53667 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
LIMK1P53667 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK1P53667 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LIMK1P53667 RN7SKP227-201ENST00000364445 330 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 RNU6-304P-201ENST00000364855 107 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LIMK1P53667 RNU6-40P-201ENST00000384254 107 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 MIR105-1-201ENST00000385222 81 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 GLULP6-201ENST00000399502 913 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.17□□□□□ -1.58
LIMK1P53667 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMK1P53667 RPS26P4-201ENST00000431743 355 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 TMEM183AP1-205ENST00000432739 290 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 MTND4P15-201ENST00000437913 1033 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AL359265.1-201ENST00000440296 795 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.17□□□□□ -1.58
LIMK1P53667 AC006967.1-201ENST00000467608 589 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 METTL15P1-201ENST00000481421 1045 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 HMGN2P25-201ENST00000486956 268 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AC140172.1-201ENST00000502928 141 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 MTCO1P31-201ENST00000506355 492 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AC093770.1-201ENST00000511559 571 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 SETP12-201ENST00000514068 805 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AC034244.2-201ENST00000514668 858 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMK1P53667 OR8K2P-201ENST00000524645 927 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMK1P53667 AC137627.1-201ENST00000545761 289 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.17□□□□□ -1.58
LIMK1P53667 MIR1254-2-201ENST00000579553 63 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AC133552.5-201ENST00000604266 540 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AL355802.4-201ENST00000607635 548 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 AL139124.1-201ENST00000609123 421 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms