Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC092435.4-201ENST00000623012 4159 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AC007342.7-201ENST00000624610 2337 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CR1P49238 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CR1P49238 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CR1P49238 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CR1P49238 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CR1P49238 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CR1P49238 IL6STP1-201ENST00000346911 1020 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 SNORD65-201ENST00000391079 73 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AL512430.2-201ENST00000406786 339 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 U3.35-201ENST00000408405 208 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 GJA6P-201ENST00000415117 1042 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CR1P49238 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CR1P49238 E2F6P2-201ENST00000420708 748 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AC099336.2-201ENST00000422457 254 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AC006065.1-201ENST00000422539 802 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 OR6K4P-201ENST00000423179 955 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.24□□□□□ -1.73
CX3CR1P49238 PA2G4P6-201ENST00000438325 1197 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CR1P49238 BUD31P2-201ENST00000449374 300 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AC099560.2-201ENST00000457554 255 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CR1P49238 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CR1P49238 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CR1P49238 RNA5SP92-201ENST00000516437 110 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.24□□□□□ -1.73
CX3CR1P49238 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CR1P49238 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CR1P49238 AL049839.1-201ENST00000556151 657 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AC006116.3-201ENST00000592968 361 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.24□□□□□ -1.73
CX3CR1P49238 BMS1P7-201ENST00000602440 1052 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AC084373.1-201ENST00000603311 235 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AL121612.2-201ENST00000612261 482 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 MIR6826-201ENST00000617808 98 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 AC015908.5-201ENST00000623289 343 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.24□□□□□ -1.73
CX3CR1P49238 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 LINC01739-205ENST00000641890 573 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CR1P49238 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CR1P49238 AL590763.1-201ENST00000398297 1545 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 MTCO1P11-201ENST00000429111 1528 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
CX3CR1P49238 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CX3CR1P49238 AC087565.3-202ENST00000642085 1603 ntBASIC4.24□□□□□ -1.73
CX3CR1P49238 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CX3CR1P49238 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CR1P49238 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CR1P49238 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CR1P49238 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CR1P49238 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CX3CR1P49238 RNU1-106P-201ENST00000384382 164 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 SNORA70-201ENST00000384436 135 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 AP002530.1-201ENST00000405705 684 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CR1P49238 RNA5SP345-201ENST00000410646 108 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 RN7SKP273-201ENST00000411392 314 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 NPM1P26-201ENST00000426339 738 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 RPS26P47-201ENST00000427219 348 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.23□□□□□ -1.73
CX3CR1P49238 AC004938.1-201ENST00000438468 308 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CR1P49238 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CR1P49238 OTX2P1-201ENST00000450956 354 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 CLIC4P1-201ENST00000453177 535 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 BX284632.1-201ENST00000478218 541 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 STRADBP1-201ENST00000478954 1281 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CX3CR1P49238 AC109462.1-201ENST00000491087 368 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CR1P49238 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CR1P49238 HAUS8P1-201ENST00000549005 542 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CR1P49238 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CR1P49238 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CR1P49238 EIF3FP1-201ENST00000613970 806 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 AC107905.1-201ENST00000616204 426 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 AL022401.1-201ENST00000619498 108 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CR1P49238 AC006453.5-201ENST00000636451 619 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CX3CR1P49238 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
CX3CR1P49238 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CX3CR1P49238 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CX3CR1P49238 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CR1P49238 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CR1P49238 AL672167.1-205ENST00000641112 3080 ntBASIC4.23□□□□□ -1.73
CX3CR1P49238 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CX3CR1P49238 AC099654.2-201ENST00000433031 1980 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms