Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
TOP2AP11388 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TOP2AP11388 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC7.78□□□□□ -1.16
TOP2AP11388 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TOP2AP11388 EI24P3-201ENST00000399046 1062 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 AC009237.10-201ENST00000414112 510 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.78□□□□□ -1.16
TOP2AP11388 AC022034.3-201ENST00000471393 478 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.78□□□□□ -1.16
TOP2AP11388 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.78□□□□□ -1.16
TOP2AP11388 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC7.78□□□□□ -1.16
TOP2AP11388 MIR7151-201ENST00000617477 60 ntBASIC7.78□□□□□ -1.16
TOP2AP11388 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
TOP2AP11388 AC105074.1-201ENST00000623380 3095 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.77□□□□□ -1.17
TOP2AP11388 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOP2AP11388 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOP2AP11388 RNA5SP44-201ENST00000410446 133 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 AL590806.1-201ENST00000415818 853 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TOP2AP11388 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TOP2AP11388 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.77□□□□□ -1.17
TOP2AP11388 RPS27AP17-201ENST00000463344 455 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 CR383656.1-201ENST00000484916 377 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 RNA5SP49-201ENST00000516450 115 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.77□□□□□ -1.17
TOP2AP11388 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.77□□□□□ -1.17
TOP2AP11388 AC010201.1-201ENST00000605051 540 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 AC039056.2-201ENST00000622261 511 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 TMEM30CP-203ENST00000637814 1035 ntBASIC7.77□□□□□ -1.17
TOP2AP11388 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOP2AP11388 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TOP2AP11388 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
TOP2AP11388 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
TOP2AP11388 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.76□□□□□ -1.17
TOP2AP11388 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 RNU1-63P-201ENST00000383902 164 ntBASIC7.76□□□□□ -1.17
TOP2AP11388 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC7.76□□□□□ -1.17
TOP2AP11388 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TOP2AP11388 RPL21P91-201ENST00000429231 479 ntBASIC7.76□□□□□ -1.17
TOP2AP11388 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.76□□□□□ -1.17
TOP2AP11388 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 MIR4660-201ENST00000583549 74 ntBASIC7.76□□□□□ -1.17
TOP2AP11388 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.76□□□□□ -1.17
TOP2AP11388 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.76□□□□□ -1.17
TOP2AP11388 CDRT1-208ENST00000630868 794 ntBASIC7.76□□□□□ -1.17
TOP2AP11388 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 AC073342.2-201ENST00000595842 1800 ntBASIC7.76□□□□□ -1.17
TOP2AP11388 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TOP2AP11388 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOP2AP11388 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TOP2AP11388 AL359922.3-201ENST00000624779 1670 ntBASIC7.75□□□□□ -1.17
TOP2AP11388 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TOP2AP11388 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TOP2AP11388 RNU1-14P-201ENST00000362759 152 ntBASIC7.75□□□□□ -1.17
TOP2AP11388 CEACAMP8-201ENST00000413902 580 ntBASIC7.75□□□□□ -1.17
TOP2AP11388 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.75□□□□□ -1.17
TOP2AP11388 ENSA-211ENST00000503345 793 ntTSL 3 BASIC7.75□□□□□ -1.17
TOP2AP11388 AL592156.1-201ENST00000508758 304 ntBASIC7.75□□□□□ -1.17
TOP2AP11388 RNA5SP519-201ENST00000516480 119 ntBASIC7.75□□□□□ -1.17
TOP2AP11388 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TOP2AP11388 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TOP2AP11388 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TOP2AP11388 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TOP2AP11388 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC7.74□□□□□ -1.17
TOP2AP11388 AC011755.1-201ENST00000623763 2049 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 AL136164.3-201ENST00000624429 3978 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
TOP2AP11388 RN7SKP235-201ENST00000410662 305 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 ARAFP1-201ENST00000422172 605 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 AC004938.1-201ENST00000438468 308 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 AC012671.1-201ENST00000451912 203 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 RNA5SP246-201ENST00000458909 119 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 RPS20P4-201ENST00000461659 355 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.74□□□□□ -1.17
TOP2AP11388 MTCO1P49-201ENST00000523429 802 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 MIR4444-1-201ENST00000581696 74 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 MIR4444-2-201ENST00000584390 74 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 ADAD1P2-201ENST00000588476 646 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
TOP2AP11388 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
TOP2AP11388 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
TOP2AP11388 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.74□□□□□ -1.17
TOP2AP11388 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
TOP2AP11388 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.74□□□□□ -1.17
TOP2AP11388 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms