Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.16□□□□□ -1.58
TPM1P09493 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.16□□□□□ -1.58
TPM1P09493 RPL5P30-201ENST00000465511 891 ntBASIC5.16□□□□□ -1.58
TPM1P09493 RN7SL214P-201ENST00000487317 265 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AC025164.1-201ENST00000496249 478 ntBASIC5.16□□□□□ -1.58
TPM1P09493 PPM1AP1-201ENST00000502740 1135 ntBASIC5.16□□□□□ -1.58
TPM1P09493 SNRPCP2-201ENST00000504370 475 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.16□□□□□ -1.58
TPM1P09493 RNA5SP228-201ENST00000516232 133 ntBASIC5.16□□□□□ -1.58
TPM1P09493 RNU1-6P-201ENST00000516290 144 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.16□□□□□ -1.58
TPM1P09493 AC100770.1-201ENST00000532310 322 ntBASIC5.16□□□□□ -1.58
TPM1P09493 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.16□□□□□ -1.58
TPM1P09493 AC092490.3-201ENST00000545370 572 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AC069240.1-201ENST00000548774 375 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM1P09493 AC015912.2-201ENST00000571053 181 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AC020978.7-201ENST00000575953 1187 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.16□□□□□ -1.58
TPM1P09493 AC008759.1-201ENST00000589783 983 ntBASIC5.16□□□□□ -1.58
TPM1P09493 VN1R81P-201ENST00000602085 372 ntBASIC5.16□□□□□ -1.58
TPM1P09493 OR7A19P-201ENST00000608051 733 ntBASIC5.16□□□□□ -1.58
TPM1P09493 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.16□□□□□ -1.58
TPM1P09493 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM1P09493 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.16□□□□□ -1.58
TPM1P09493 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TPM1P09493 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TPM1P09493 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
TPM1P09493 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.16□□□□□ -1.58
TPM1P09493 AC006971.1-201ENST00000407916 4486 ntBASIC5.16□□□□□ -1.58
TPM1P09493 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TPM1P09493 ZFRP1-201ENST00000457579 2970 ntBASIC5.15□□□□□ -1.58
TPM1P09493 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.15□□□□□ -1.58
TPM1P09493 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TPM1P09493 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TPM1P09493 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TPM1P09493 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TPM1P09493 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TPM1P09493 RNA5SP242-201ENST00000364171 118 ntBASIC5.15□□□□□ -1.59
TPM1P09493 MIR621-201ENST00000384919 96 ntBASIC5.15□□□□□ -1.59
TPM1P09493 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TPM1P09493 AP002530.1-201ENST00000405705 684 ntBASIC5.15□□□□□ -1.59
TPM1P09493 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.15□□□□□ -1.59
TPM1P09493 RNU6-233P-201ENST00000410845 141 ntBASIC5.15□□□□□ -1.59
TPM1P09493 AC114755.2-201ENST00000413520 361 ntBASIC5.15□□□□□ -1.59
TPM1P09493 GTF2IP5-201ENST00000414608 731 ntBASIC5.15□□□□□ -1.59
TPM1P09493 MTCO1P51-201ENST00000427672 1060 ntBASIC5.15□□□□□ -1.59
TPM1P09493 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.15□□□□□ -1.59
TPM1P09493 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.15□□□□□ -1.59
TPM1P09493 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.15□□□□□ -1.59
TPM1P09493 AC245047.2-201ENST00000441060 530 ntBASIC5.15□□□□□ -1.59
TPM1P09493 RPL10P17-201ENST00000453852 316 ntBASIC5.15□□□□□ -1.59
TPM1P09493 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.15□□□□□ -1.59
TPM1P09493 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.15□□□□□ -1.59
TPM1P09493 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TPM1P09493 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.15□□□□□ -1.59
TPM1P09493 MIR3614-201ENST00000581261 86 ntBASIC5.15□□□□□ -1.59
TPM1P09493 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.15□□□□□ -1.59
TPM1P09493 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.15□□□□□ -1.59
TPM1P09493 AL627230.1-201ENST00000613077 211 ntBASIC5.15□□□□□ -1.59
TPM1P09493 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.15□□□□□ -1.59
TPM1P09493 AL591926.8-201ENST00000616876 211 ntBASIC5.15□□□□□ -1.59
TPM1P09493 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.15□□□□□ -1.59
TPM1P09493 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
TPM1P09493 CR383656.5-201ENST00000547616 1340 ntBASIC5.15□□□□□ -1.59
TPM1P09493 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TPM1P09493 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.15□□□□□ -1.59
TPM1P09493 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TPM1P09493 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.14□□□□□ -1.59
TPM1P09493 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
TPM1P09493 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
TPM1P09493 RNA5SP104-201ENST00000410989 118 ntBASIC5.14□□□□□ -1.59
TPM1P09493 GSTM3P2-201ENST00000412746 530 ntBASIC5.14□□□□□ -1.59
TPM1P09493 BMS1P13-201ENST00000417301 885 ntBASIC5.14□□□□□ -1.59
TPM1P09493 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.14□□□□□ -1.59
TPM1P09493 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.14□□□□□ -1.59
TPM1P09493 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.14□□□□□ -1.59
TPM1P09493 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.14□□□□□ -1.59
TPM1P09493 AL606490.1-201ENST00000452266 765 ntBASIC5.14□□□□□ -1.59
TPM1P09493 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 OR51K1P-201ENST00000510214 950 ntBASIC5.14□□□□□ -1.59
TPM1P09493 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.14□□□□□ -1.59
TPM1P09493 PPBPP1-201ENST00000510807 373 ntBASIC5.14□□□□□ -1.59
TPM1P09493 RNA5SP154-201ENST00000516193 111 ntBASIC5.14□□□□□ -1.59
TPM1P09493 snoU109.6-201ENST00000516831 118 ntBASIC5.14□□□□□ -1.59
TPM1P09493 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.14□□□□□ -1.59
TPM1P09493 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.14□□□□□ -1.59
TPM1P09493 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 AC091178.1-203ENST00000584586 279 ntBASIC5.14□□□□□ -1.59
TPM1P09493 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 RPL7P50-201ENST00000600588 727 ntBASIC5.14□□□□□ -1.59
TPM1P09493 IMMP1LP3-201ENST00000604197 224 ntBASIC5.14□□□□□ -1.59
TPM1P09493 AP001521.2-201ENST00000608772 546 ntBASIC5.14□□□□□ -1.59
TPM1P09493 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TPM1P09493 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms