Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC090013.1-201ENST00000485147 480 ntBASIC5.23□□□□□ -1.57
TPM3P06753 AC025164.1-201ENST00000496249 478 ntBASIC5.23□□□□□ -1.57
TPM3P06753 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM3P06753 AC083829.1-201ENST00000503756 657 ntBASIC5.23□□□□□ -1.57
TPM3P06753 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.23□□□□□ -1.57
TPM3P06753 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM3P06753 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM3P06753 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TPM3P06753 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM3P06753 AC091178.1-203ENST00000584586 279 ntBASIC5.23□□□□□ -1.57
TPM3P06753 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM3P06753 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM3P06753 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM3P06753 IMMP1LP3-201ENST00000604197 224 ntBASIC5.23□□□□□ -1.57
TPM3P06753 AC004477.3-201ENST00000614061 590 ntBASIC5.23□□□□□ -1.57
TPM3P06753 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM3P06753 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM3P06753 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM3P06753 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TPM3P06753 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM3P06753 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.23□□□□□ -1.57
TPM3P06753 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TPM3P06753 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.23□□□□□ -1.57
TPM3P06753 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM3P06753 AC012020.1-201ENST00000624541 1728 ntBASIC5.23□□□□□ -1.57
TPM3P06753 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM3P06753 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM3P06753 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM3P06753 AC099654.2-201ENST00000433031 1980 ntBASIC5.22□□□□□ -1.57
TPM3P06753 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM3P06753 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM3P06753 AC009302.1-201ENST00000417147 390 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AL513325.1-201ENST00000417716 1034 ntBASIC5.22□□□□□ -1.57
TPM3P06753 RPL21P43-201ENST00000425440 472 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.22□□□□□ -1.57
TPM3P06753 OR52B5P-201ENST00000435337 951 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM3P06753 RPS27AP15-201ENST00000447672 466 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM3P06753 ZFRP1-201ENST00000457579 2970 ntBASIC5.22□□□□□ -1.57
TPM3P06753 CCDC75P1-201ENST00000469247 791 ntBASIC5.22□□□□□ -1.57
TPM3P06753 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM3P06753 VWA8P1-201ENST00000510889 176 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM3P06753 RNA5SP497-201ENST00000516081 97 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.22□□□□□ -1.57
TPM3P06753 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TPM3P06753 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM3P06753 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM3P06753 AC007390.2-201ENST00000606229 3803 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AL591926.8-201ENST00000616876 211 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AL022401.1-201ENST00000619498 108 ntBASIC5.22□□□□□ -1.57
TPM3P06753 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TPM3P06753 OR52B5P-202ENST00000641118 1110 ntBASIC5.22□□□□□ -1.57
TPM3P06753 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TPM3P06753 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM3P06753 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TPM3P06753 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TPM3P06753 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
TPM3P06753 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TPM3P06753 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
TPM3P06753 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TPM3P06753 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 SNORA17A-201ENST00000391185 133 ntBASIC5.21□□□□□ -1.58
TPM3P06753 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 RPL23AP48-201ENST00000406913 488 ntBASIC5.21□□□□□ -1.58
TPM3P06753 OR3A2-201ENST00000408891 1076 ntBASIC5.21□□□□□ -1.58
TPM3P06753 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM3P06753 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM3P06753 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM3P06753 SLC25A18P1-201ENST00000449385 454 ntBASIC5.21□□□□□ -1.58
TPM3P06753 AC023141.9-201ENST00000458734 412 ntBASIC5.21□□□□□ -1.58
TPM3P06753 RN7SL741P-201ENST00000482473 289 ntBASIC5.21□□□□□ -1.58
TPM3P06753 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.21□□□□□ -1.58
TPM3P06753 AC093249.4-201ENST00000564755 259 ntBASIC5.21□□□□□ -1.58
TPM3P06753 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM3P06753 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM3P06753 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM3P06753 AC074276.2-201ENST00000619891 348 ntBASIC5.21□□□□□ -1.58
TPM3P06753 SNORA17.5-201ENST00000630429 132 ntBASIC5.21□□□□□ -1.58
TPM3P06753 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TPM3P06753 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM3P06753 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM3P06753 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TPM3P06753 AC097504.1-201ENST00000515103 2415 ntBASIC5.21□□□□□ -1.58
TPM3P06753 CR382285.2-201ENST00000624662 1495 ntBASIC5.2□□□□□ -1.58
TPM3P06753 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM3P06753 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TPM3P06753 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM3P06753 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM3P06753 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms