Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DOAP06340 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AL355834.1-201ENST00000556602 3965 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DOAP06340 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 HNRNPDP2-201ENST00000406475 478 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 MTATP6P20-201ENST00000414147 562 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 KRR1P1-201ENST00000419430 803 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC016907.1-201ENST00000419483 435 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 OR2AM1P-201ENST00000422137 422 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 RPL19P16-201ENST00000433839 588 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 OR10R1P-201ENST00000441524 1141 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC245517.2-201ENST00000442890 346 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 Z80107.2-201ENST00000445127 392 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 OR6K5P-201ENST00000447050 945 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AL354714.3-201ENST00000447284 493 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC092324.1-201ENST00000468671 324 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 RPL7P16-201ENST00000479738 738 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC008427.1-201ENST00000503102 655 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC093770.1-201ENST00000511559 571 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 RNU6-319P-201ENST00000516025 108 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 SEPT10P1-201ENST00000517342 1162 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC008033.2-201ENST00000542626 177 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC015726.1-201ENST00000602353 681 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC105254.2-201ENST00000603636 436 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 QTRT1P1-201ENST00000604344 1078 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC012213.4-201ENST00000606457 354 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC091304.6-201ENST00000619761 202 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC087385.3-201ENST00000620477 187 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 AL512506.2-201ENST00000624472 458 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 FRG1DP-201ENST00000635586 771 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 OR10AB1P-202ENST00000641219 1686 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DOAP06340 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DOAP06340 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DOAP06340 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DOAP06340 MTND4P8-201ENST00000514997 1362 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 RN7SKP149-201ENST00000363008 344 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 RN7SKP145-201ENST00000363291 303 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 PTP4A1P7-201ENST00000423476 514 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AL360081.1-201ENST00000428299 555 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AL049745.1-201ENST00000433953 286 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 RPL7P33-201ENST00000444159 742 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 HMGB1P26-201ENST00000452520 628 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC108161.1-201ENST00000461060 402 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC010374.1-201ENST00000503762 1237 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 HPRT1P1-201ENST00000509498 657 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 MTND4LP31-201ENST00000514859 294 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC009097.3-201ENST00000563557 1018 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 EIF1P5-201ENST00000585002 234 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC110760.3-201ENST00000598794 467 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC104785.1-201ENST00000603220 588 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 MEMO1P5-201ENST00000604810 406 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms