Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL133244.1-201ENST00000456007 258 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 snoU13.20-201ENST00000459180 104 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 HMGN1P8-201ENST00000463578 288 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN9O95484 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN9O95484 AC092593.2-201ENST00000513866 913 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.61□□□□□ -1.67
CLDN9O95484 AC133555.2-201ENST00000550213 292 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 AC079075.1-201ENST00000559543 878 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 AL390726.5-202ENST00000564800 256 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 CD24P2-201ENST00000565486 219 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 RN7SL802P-201ENST00000577858 299 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 MIR4700-201ENST00000578311 74 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 MIR5699-201ENST00000578903 90 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.61□□□□□ -1.67
CLDN9O95484 AC022726.1-201ENST00000587475 207 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 AC011453.2-201ENST00000603737 729 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 IMMP1LP1-201ENST00000605170 488 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN9O95484 AC107905.1-201ENST00000616204 426 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 AL136164.3-201ENST00000624429 3978 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN9O95484 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN9O95484 AC097461.1-201ENST00000568928 2821 ntBASIC4.61□□□□□ -1.67
CLDN9O95484 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLDN9O95484 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
CLDN9O95484 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN9O95484 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN9O95484 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN9O95484 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CLDN9O95484 RNA5SP507-201ENST00000363603 121 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLDN9O95484 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLDN9O95484 AL136131.1-201ENST00000406079 803 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN9O95484 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
CLDN9O95484 TRIM60P17-201ENST00000415181 719 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN9O95484 RPL7P57-201ENST00000423238 740 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 MTND4LP13-201ENST00000425022 298 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AL392003.1-201ENST00000434394 243 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AL627308.1-201ENST00000435693 821 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 CEACAMP7-201ENST00000444105 496 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 TDGF1P1-201ENST00000445734 527 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AL589765.3-201ENST00000446084 462 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 TRY2P-201ENST00000448860 689 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 RN7SL610P-201ENST00000463845 291 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AC008410.1-201ENST00000483777 339 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN9O95484 AC147055.3-201ENST00000510547 851 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 RNU1-6P-201ENST00000516290 144 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AC008676.3-201ENST00000521237 435 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 MORF4L1P3-201ENST00000525966 950 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 GCSHP4-201ENST00000538792 439 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 HMGN2P6-201ENST00000551091 273 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN9O95484 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CLDN9O95484 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.6□□□□□ -1.67
CLDN9O95484 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN9O95484 AC233702.9-201ENST00000581528 203 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN9O95484 AC011487.3-201ENST00000593607 453 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AC087763.1-201ENST00000603391 286 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN9O95484 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN9O95484 AL121890.2-201ENST00000617644 465 ntBASIC4.6□□□□□ -1.67
CLDN9O95484 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN9O95484 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLDN9O95484 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLDN9O95484 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN9O95484 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CLDN9O95484 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN9O95484 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CLDN9O95484 RNA5SP123-201ENST00000363244 119 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 MIR105-2-201ENST00000385083 81 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 U3.30-201ENST00000391308 210 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 NCLP2-201ENST00000416078 1462 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN9O95484 RBMY2QP-201ENST00000429799 1147 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN9O95484 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN9O95484 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN9O95484 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN9O95484 AURKAPS2-201ENST00000454983 333 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 AL356390.1-201ENST00000455684 397 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 ZFRP1-201ENST00000457579 2970 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 RN7SL826P-201ENST00000479724 288 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN9O95484 AC104971.1-201ENST00000495117 578 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.59□□□□□ -1.67
CLDN9O95484 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.59□□□□□ -1.67
CLDN9O95484 AC110775.1-201ENST00000513721 462 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN9O95484 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN9O95484 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN9O95484 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms