Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC087783.2-201ENST00000605070 562 ntBASIC5.21□□□□□ -1.58
O00370 AC012213.4-201ENST00000606457 354 ntBASIC5.21□□□□□ -1.58
O00370 AC097505.1-201ENST00000610199 565 ntBASIC5.21□□□□□ -1.58
O00370 AC090510.2-201ENST00000617465 629 ntBASIC5.21□□□□□ -1.58
O00370 AC019206.1-201ENST00000621938 425 ntBASIC5.21□□□□□ -1.58
O00370 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
O00370 AC099654.2-201ENST00000433031 1980 ntBASIC5.21□□□□□ -1.58
O00370 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
O00370 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
O00370 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
O00370 AP001273.1-201ENST00000624493 3152 ntBASIC5.21□□□□□ -1.58
O00370 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
O00370 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
O00370 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.21□□□□□ -1.58
O00370 AC008758.3-201ENST00000507003 1829 ntBASIC5.2□□□□□ -1.58
O00370 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.2□□□□□ -1.58
O00370 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
O00370 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.2□□□□□ -1.58
O00370 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
O00370 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
O00370 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
O00370 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
O00370 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
O00370 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 SNORA51.8-201ENST00000384234 132 ntBASIC5.2□□□□□ -1.58
O00370 AC007394.1-201ENST00000421941 531 ntBASIC5.2□□□□□ -1.58
O00370 AC093084.1-201ENST00000424233 687 ntBASIC5.2□□□□□ -1.58
O00370 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.2□□□□□ -1.58
O00370 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.2□□□□□ -1.58
O00370 MTCO1P57-201ENST00000432182 261 ntBASIC5.2□□□□□ -1.58
O00370 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.2□□□□□ -1.58
O00370 GYG1P1-201ENST00000460864 698 ntBASIC5.2□□□□□ -1.58
O00370 RPL32P9-201ENST00000487963 407 ntBASIC5.2□□□□□ -1.58
O00370 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.2□□□□□ -1.58
O00370 NDUFA5P12-201ENST00000503796 343 ntBASIC5.2□□□□□ -1.58
O00370 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 BTF3P13-201ENST00000513224 490 ntBASIC5.2□□□□□ -1.58
O00370 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 AL049830.4-201ENST00000555149 351 ntBASIC5.2□□□□□ -1.58
O00370 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.2□□□□□ -1.58
O00370 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.2□□□□□ -1.58
O00370 MIR4646-201ENST00000580775 63 ntBASIC5.2□□□□□ -1.58
O00370 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.2□□□□□ -1.58
O00370 AL023583.1-201ENST00000607518 1143 ntBASIC5.2□□□□□ -1.58
O00370 AP001521.2-201ENST00000608772 546 ntBASIC5.2□□□□□ -1.58
O00370 AL356274.1-201ENST00000617064 410 ntBASIC5.2□□□□□ -1.58
O00370 AL022401.1-201ENST00000619498 108 ntBASIC5.2□□□□□ -1.58
O00370 AC006213.5-201ENST00000619673 288 ntBASIC5.2□□□□□ -1.58
O00370 AL162233.1-201ENST00000620014 944 ntBASIC5.2□□□□□ -1.58
O00370 AC087385.3-201ENST00000620477 187 ntBASIC5.2□□□□□ -1.58
O00370 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.2□□□□□ -1.58
O00370 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
O00370 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 AC009643.2-201ENST00000603543 1448 ntBASIC5.2□□□□□ -1.58
O00370 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
O00370 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.2□□□□□ -1.58
O00370 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.19□□□□□ -1.58
O00370 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.19□□□□□ -1.58
O00370 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.19□□□□□ -1.58
O00370 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.19□□□□□ -1.58
O00370 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
O00370 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
O00370 RNU4-7P-201ENST00000364758 141 ntBASIC5.19□□□□□ -1.58
O00370 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
O00370 AL645733.1-201ENST00000402250 217 ntBASIC5.19□□□□□ -1.58
O00370 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 RN7SKP199-201ENST00000410325 305 ntBASIC5.19□□□□□ -1.58
O00370 RNA5SP345-201ENST00000410646 108 ntBASIC5.19□□□□□ -1.58
O00370 MTCYBP7-201ENST00000419540 1134 ntBASIC5.19□□□□□ -1.58
O00370 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.19□□□□□ -1.58
O00370 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.19□□□□□ -1.58
O00370 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.19□□□□□ -1.58
O00370 AC112498.1-201ENST00000444401 332 ntBASIC5.19□□□□□ -1.58
O00370 RPL7P61-201ENST00000451721 751 ntBASIC5.19□□□□□ -1.58
O00370 AC069277.2-201ENST00000454211 432 ntBASIC5.19□□□□□ -1.58
O00370 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.19□□□□□ -1.58
O00370 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.19□□□□□ -1.58
O00370 AC037198.2-201ENST00000478845 733 ntBASIC5.19□□□□□ -1.58
O00370 AC020890.1-201ENST00000491837 504 ntBASIC5.19□□□□□ -1.58
O00370 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms