Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC092747.4-201ENST00000620519 1861 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 MRE11P1-201ENST00000464884 2127 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 FAM3C2-201ENST00000312214 681 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 OR56B2P-201ENST00000317102 954 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 SNORA64.1-201ENST00000362600 132 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SKP269-201ENST00000365545 319 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL589647.1-201ENST00000402485 466 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 HIST1H2BPS2-201ENST00000402707 340 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC069218.2-201ENST00000411665 344 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 UBTFL2-201ENST00000411859 1191 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC119751.6-201ENST00000416712 186 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 GRPEL2P2-201ENST00000421856 670 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 VN1R20P-201ENST00000425215 966 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 HMGB1P32-201ENST00000425971 565 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 CR391992.1-201ENST00000438601 394 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 TXNP1-201ENST00000441872 371 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL163193.1-201ENST00000444895 788 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC104634.1-201ENST00000452720 462 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL354710.1-201ENST00000453641 246 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AP000873.1-201ENST00000463987 400 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 PPIAP21-201ENST00000464473 501 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL23AP14-201ENST00000468281 468 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL049830.2-201ENST00000480072 201 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC069499.1-201ENST00000489433 509 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 NENFP3-201ENST00000503735 313 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 NREP-217ENST00000509025 987 ntTSL 3 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 ZNF519P4-201ENST00000514008 125 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 NREP-223ENST00000515855 801 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 MTND5P21-201ENST00000531961 522 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL356801.1-201ENST00000559320 294 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC021483.2-201ENST00000567415 758 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR3186-201ENST00000577404 85 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 APOC2-205ENST00000592257 444 ntTSL 3 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC116651.1-201ENST00000609724 556 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR6793-201ENST00000612376 63 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL353726.1-201ENST00000614041 1000 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC004801.6-201ENST00000616571 978 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL591926.8-201ENST00000616876 211 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AL359757.1-201ENST00000623176 255 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC243960.7-201ENST00000623532 707 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC021106.3-201ENST00000623925 531 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC022919.1-201ENST00000624979 626 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 RNF123-214ENST00000629802 207 ntTSL 5 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 U6.98-201ENST00000637157 84 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 AC000367.1-201ENST00000452711 1766 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 MAPK10-263ENST00000641052 4307 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms