Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 HMGN2P27-201ENST00000427352 270 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 C4BPAP2-201ENST00000428434 478 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AP001324.1-201ENST00000428553 399 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 MTND4LP12-201ENST00000448237 295 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AL935212.3-201ENST00000450729 284 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 Z95152.1-201ENST00000453556 656 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AC020890.1-201ENST00000491837 504 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AP001960.1-201ENST00000506494 658 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AC016839.1-201ENST00000578162 867 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 RNU6-84P-201ENST00000607737 102 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 MIR6758-201ENST00000620653 63 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AL672167.1-204ENST00000641875 3017 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 VN2R3P-201ENST00000422626 1412 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 MTHFD2P5-201ENST00000320415 844 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 SNORA62-201ENST00000365493 153 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AC136624.1-201ENST00000400791 413 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 RAB28P1-201ENST00000411517 641 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 P2RY10P2-201ENST00000416730 913 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AL691447.1-201ENST00000419456 387 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AC013268.2-201ENST00000420753 337 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AL592293.2-201ENST00000422292 996 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 TDGF1P1-201ENST00000445734 527 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 EIF2S2P2-201ENST00000447161 982 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AC092905.1-201ENST00000467527 949 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 RPL21P126-201ENST00000470049 478 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 RNA5SP303-201ENST00000516192 130 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 AC105105.5-201ENST00000622635 1294 ntBASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMIM28A0A1B0GU29 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 DDX18P6-201ENST00000450119 1997 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL731532.2-201ENST00000623542 1953 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 UGT2B26P-201ENST00000508672 1613 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 COX6CP17-201ENST00000421389 185 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL356387.2-201ENST00000422272 243 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 RPL12P34-201ENST00000424532 479 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 FTH1P16-201ENST00000435241 552 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC015912.2-201ENST00000571053 181 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC130352.1-201ENST00000602979 661 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC083809.1-201ENST00000615051 472 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL035461.2-201ENST00000619201 524 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC083837.1-201ENST00000565297 2994 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AL355852.1-201ENST00000454081 1771 ntBASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.91□□□□□ -1.62
SMIM28A0A1B0GU29 AC025031.4-201ENST00000621248 3271 ntBASIC4.9□□□□□ -1.62
SMIM28A0A1B0GU29 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 OR56B2P-201ENST00000317102 954 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms