Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTDP1Q9Y5B0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 RBPJP2-201ENST00000618187 1444 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC017079.1-201ENST00000333650 415 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC005042.1-201ENST00000393397 800 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 RN7SKP182-201ENST00000410772 298 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 DSTNP5-201ENST00000427921 523 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 RPS27P18-201ENST00000431701 247 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC073143.1-201ENST00000436316 395 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 PTMAP6-201ENST00000439110 327 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 CNOT7P2-201ENST00000441051 832 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC004022.1-201ENST00000447766 1066 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AL596266.1-201ENST00000448132 400 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 BUD31P2-201ENST00000449374 300 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 FAR2P1-206ENST00000449736 709 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 RPL7AP10-201ENST00000481016 791 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 BET1P1-201ENST00000482276 359 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC004815.1-201ENST00000484185 331 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC072052.1-201ENST00000496556 306 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC113420.1-201ENST00000507903 571 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 MRPS36P3-201ENST00000519284 130 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AL512310.9-201ENST00000553311 948 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 ZNF971P-201ENST00000562068 1249 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AP005403.1-201ENST00000579720 229 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 CCDC58P3-201ENST00000590792 430 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC119501.1-201ENST00000603646 475 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC026585.1-201ENST00000619582 524 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 AC011933.2-201ENST00000578539 2790 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 OR10AB1P-202ENST00000641219 1686 ntBASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.36□□□□□ -1.39
CTDP1Q9Y5B0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC008432.1-201ENST00000615912 1320 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AL121886.1-201ENST00000358609 435 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 RNA5SP507-201ENST00000363603 121 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 RNU1-146P-201ENST00000364015 165 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 RNU1-136P-201ENST00000384181 164 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 SNORA67-201ENST00000384423 137 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 GSTM5P1-201ENST00000434751 660 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 RPL21P47-201ENST00000483696 477 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC008147.3-201ENST00000548666 354 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC126177.5-201ENST00000549599 178 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms