Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR921-201ENST00000401133 56 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AL589647.1-201ENST00000402485 466 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 RN7SKP100-201ENST00000411258 284 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AL591848.1-201ENST00000413092 322 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 RPS26P13-201ENST00000419030 330 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 MTND4LP14-201ENST00000429447 288 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 MTND4LP7-201ENST00000431728 294 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC090142.1-201ENST00000465776 462 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 RPL36AP41-201ENST00000493820 306 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC106806.2-201ENST00000509365 500 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 NPM1P52-201ENST00000518264 846 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC073091.2-201ENST00000603205 907 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC006363.1-201ENST00000603806 463 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 OR4H6P-202ENST00000603819 340 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC084036.1-201ENST00000609190 508 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC097505.1-201ENST00000610199 565 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC006249.1-201ENST00000621223 471 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC135352.1-201ENST00000506173 1418 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC125336.1-201ENST00000508893 2827 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC108751.5-201ENST00000492880 1336 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AL355852.1-201ENST00000454081 1771 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 MTND2P9-201ENST00000422293 931 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC005154.2-201ENST00000438110 379 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 RPL31P44-201ENST00000447680 377 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 IGLV2-34-201ENST00000490007 283 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 DEFB109F-201ENST00000491870 277 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 RNU2-30P-201ENST00000516209 141 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 SCARNA21.2-201ENST00000516600 166 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AP003049.1-201ENST00000529418 457 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AL110118.1-201ENST00000553543 400 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 OR1F2P-201ENST00000570470 933 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AL391001.1-201ENST00000602747 715 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AL031320.1-201ENST00000604177 357 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AL391358.1-201ENST00000605342 190 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC135803.1-201ENST00000608748 565 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 MIR7155-201ENST00000615925 56 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC090510.2-201ENST00000617465 629 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 AC133552.1-201ENST00000569988 4007 ntBASIC5.02□□□□□ -1.61
SIX2Q9NPC8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX2Q9NPC8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC132825.1-201ENST00000463573 2247 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 RNU6-1176P-201ENST00000390955 107 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC140479.3-201ENST00000418944 1126 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms