Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VAT1LQ9HCJ6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VAT1LQ9HCJ6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
VAT1LQ9HCJ6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAT1LQ9HCJ6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 CASC19-206ENST00000641028 1430 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AL121950.1-201ENST00000624993 2077 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 SNORD113.2-201ENST00000364166 89 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 SNORA70F-201ENST00000384142 135 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 U3.35-201ENST00000408405 208 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC068287.1-201ENST00000430283 295 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC096741.1-201ENST00000472250 846 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 OR52A4P-201ENST00000472867 958 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC098583.1-201ENST00000480875 255 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC025857.1-201ENST00000525252 377 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AL121839.1-201ENST00000556233 1185 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 RN7SL690P-201ENST00000582087 240 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC209154.1-201ENST00000582156 337 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC068790.4-201ENST00000602474 263 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC093765.1-201ENST00000603758 881 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC004232.3-201ENST00000622977 525 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC011815.3-201ENST00000624194 473 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 AC073869.7-201ENST00000640874 297 ntBASIC5.4□□□□□ -1.54
VAT1LQ9HCJ6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 AC108467.2-201ENST00000617640 1597 ntBASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAT1LQ9HCJ6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AL672167.1-204ENST00000641875 3017 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 Y_RNA.62-201ENST00000362840 99 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 RNA5SP443-201ENST00000363083 132 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AL807761.1-201ENST00000417622 171 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AL355994.1-201ENST00000424379 260 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 CKS1BP6-201ENST00000424932 240 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 MTND4LP12-201ENST00000448237 295 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 RHEBP2-201ENST00000450289 600 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 snoU13.1-201ENST00000459157 104 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 RPL5P22-201ENST00000480199 884 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AGGF1P3-201ENST00000493675 1213 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 MORF4L2P1-201ENST00000503761 858 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 HIGD1AP5-201ENST00000529959 259 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC011270.1-201ENST00000558606 583 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AL390726.5-202ENST00000564800 256 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC010487.1-201ENST00000594408 1172 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC068870.3-201ENST00000625077 2536 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC015813.6-201ENST00000624409 5808 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 DHX40P1-201ENST00000588725 1412 ntBASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAT1LQ9HCJ6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAT1LQ9HCJ6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAT1LQ9HCJ6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAT1LQ9HCJ6 AL132640.2-201ENST00000559968 1698 ntBASIC5.38□□□□□ -1.55
VAT1LQ9HCJ6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAT1LQ9HCJ6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms