Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SUDS3Q9H7L9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.15□□□□□ -1.59
SUDS3Q9H7L9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SUDS3Q9H7L9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SUDS3Q9H7L9 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SUDS3Q9H7L9 AC123912.3-201ENST00000600907 1367 ntBASIC5.15□□□□□ -1.59
SUDS3Q9H7L9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SUDS3Q9H7L9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AP000756.2-201ENST00000624168 2567 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 CUL4AP1-201ENST00000514750 1863 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 DPY19L1P2-201ENST00000426647 915 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 RPS27P18-201ENST00000431701 247 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AL035551.1-201ENST00000446931 348 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 CYCSP34-201ENST00000458172 304 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC016687.1-201ENST00000482574 353 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC018797.3-201ENST00000513388 1241 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC234775.3-201ENST00000564612 656 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 ADAM3B-201ENST00000569937 840 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC095055.1-201ENST00000603472 1113 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AP005432.2-201ENST00000608162 586 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC020763.5-201ENST00000623298 430 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AC090017.1-201ENST00000548612 1779 ntBASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.14□□□□□ -1.59
SUDS3Q9H7L9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AL133412.1-201ENST00000380194 2992 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 PHKBP1-201ENST00000450951 1951 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 RNU6-167P-201ENST00000384292 106 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 NUDT19P3-201ENST00000404698 555 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AL035079.1-201ENST00000405210 287 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AL590762.4-201ENST00000425885 253 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC009238.2-201ENST00000431026 355 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AL138787.1-202ENST00000437804 898 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 RN7SL329P-201ENST00000467740 299 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC112206.1-201ENST00000468416 477 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC090142.2-201ENST00000483263 416 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 Mico1.1-201ENST00000611698 204 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AP002799.1-201ENST00000623552 423 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 LINC01739-205ENST00000641890 573 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 AC131971.1-201ENST00000332881 1482 ntBASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SUDS3Q9H7L9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms