Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC073429.2-201ENST00000569694 1444 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 RNA5SP321-201ENST00000362722 111 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 RN7SKP15-201ENST00000364742 309 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 MIR323B-201ENST00000385269 82 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 MIR92A2-201ENST00000385299 75 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 RNA5SP431-201ENST00000410312 120 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 FCF1P2-201ENST00000415284 583 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC012519.1-201ENST00000424588 610 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 RPL12P16-201ENST00000431098 498 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AL645939.3-201ENST00000435408 225 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC243772.1-201ENST00000451620 410 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC104689.1-201ENST00000473356 768 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 SNRPCP3-201ENST00000474888 476 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC069304.1-201ENST00000491593 704 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC113367.2-201ENST00000505749 160 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC093281.2-201ENST00000510153 597 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 EIF3KP3-201ENST00000514461 639 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 MTCO1P30-201ENST00000515244 580 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 OR5AK1P-201ENST00000524837 922 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AP003033.1-201ENST00000527244 415 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC093519.1-201ENST00000566109 298 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 MIR3189-201ENST00000578735 73 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 PCMTD1P7-201ENST00000634506 357 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC087565.3-203ENST00000641018 837 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC232271.1-201ENST00000602455 2715 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 SAGE3P-201ENST00000619800 1635 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 DDX43P2-201ENST00000604753 1354 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AC011416.1-201ENST00000514947 1732 ntBASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM55Q9BYV6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC092070.2-203ENST00000598377 3644 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RNU6-500P-201ENST00000362349 107 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 U3.52-201ENST00000384034 216 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RNA5SP122-201ENST00000384457 108 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 MT-TH-201ENST00000387441 69 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 PRELID1P1-201ENST00000403549 660 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RPL5P20-201ENST00000403848 896 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 PIGPP2-201ENST00000411569 458 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RPS6P23-201ENST00000413224 722 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC092634.6-201ENST00000418558 192 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC007394.1-201ENST00000421941 531 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RPL7AP14-201ENST00000424041 802 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL389925.1-201ENST00000432257 728 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 NPM1P33-201ENST00000438918 872 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL354710.1-201ENST00000453641 246 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms