Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC005261.4-201ENST00000600047 1385 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AL137141.1-201ENST00000624622 4836 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 MIR323A-201ENST00000362199 86 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNA5SP242-201ENST00000364171 118 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNU5A-2P-201ENST00000384337 116 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 MIR551A-201ENST00000385042 96 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNU6-1320P-201ENST00000390838 107 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNU6-1269P-201ENST00000391139 107 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 MGAT2P2-201ENST00000427194 797 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RPL7P56-201ENST00000429441 717 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 YWHAEP5-201ENST00000431545 765 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC138761.5-201ENST00000433967 325 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AL117351.1-201ENST00000438864 766 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC019185.1-201ENST00000442718 389 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNU6-599P-201ENST00000459383 107 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNU6-1193P-201ENST00000459461 107 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RN7SL583P-201ENST00000475692 287 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC138938.1-201ENST00000515431 782 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC083923.1-201ENST00000523708 376 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC010245.2-201ENST00000606908 1167 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AL139124.1-201ENST00000609123 421 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNU6-368P-201ENST00000620928 107 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 RNU6-538P-201ENST00000622329 107 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 AC145207.9-201ENST00000623802 325 ntBASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTHRC1Q96CG8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 BX005019.1-201ENST00000561881 1810 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 NACA3P-201ENST00000359690 648 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 RNA5SP453-201ENST00000362503 119 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 RN7SKP6-201ENST00000364795 319 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 RNU6-729P-201ENST00000384399 107 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC104297.1-201ENST00000393779 870 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 ERHP2-201ENST00000402323 299 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 OR6E1P-201ENST00000414424 923 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 UBE2D3P1-201ENST00000436669 444 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 CACYBPP1-201ENST00000438592 684 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC104978.1-201ENST00000449387 391 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 RN7SL197P-201ENST00000466981 299 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC109481.1-201ENST00000509173 282 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms