Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AL031313.1-201ENST00000448435 256 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 TRY2P-201ENST00000448860 689 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AC104634.1-201ENST00000452720 462 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AZGP1P2-201ENST00000454506 345 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AC096741.1-201ENST00000472250 846 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 BRD9P1-201ENST00000529855 560 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AP002373.2-201ENST00000541631 1060 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 CR383656.6-201ENST00000550518 394 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 ZNF971P-201ENST00000562068 1249 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 AC091953.3-201ENST00000623220 236 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 KYNUP3-201ENST00000574386 1341 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 GTF2H2B-203ENST00000508065 1432 ntBASIC5.38□□□□□ -1.55
HMGB4Q8WW32 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB4Q8WW32 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC007996.1-201ENST00000620414 2821 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 RNA5SP123-201ENST00000363244 119 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 SNORA56-201ENST00000383966 129 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 MIR600-201ENST00000385007 98 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 HMGB3P18-201ENST00000406327 590 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 RIMKLBP2-201ENST00000424737 654 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC104837.2-201ENST00000427236 424 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AL358794.1-201ENST00000445689 381 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 SEPT14P24-201ENST00000447236 180 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 RPL7P48-201ENST00000461513 746 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 RPS4XP6-201ENST00000477670 797 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 GTF2F2P1-201ENST00000511083 675 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC079064.1-201ENST00000528365 362 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC122134.1-201ENST00000565664 1104 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 MIR548Y-201ENST00000582739 110 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AL160237.3-201ENST00000604114 1013 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC009597.2-201ENST00000604659 592 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC073387.2-201ENST00000604797 784 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 EIF3FP1-201ENST00000613970 806 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC006927.4-201ENST00000639187 543 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB4Q8WW32 SAMMSON-210ENST00000641260 1308 ntBASIC5.37□□□□□ -1.55
HMGB4Q8WW32 AC020633.1-201ENST00000468439 2247 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms