Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC104971.1-201ENST00000495117 578 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 MLECP1-201ENST00000615893 709 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC026367.3-201ENST00000619032 590 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC125336.1-201ENST00000508893 2827 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 SNORA66-201ENST00000384792 133 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RAB9AP4-201ENST00000415230 609 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RPL7P57-201ENST00000423238 740 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC133555.2-201ENST00000550213 292 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC093249.4-201ENST00000564755 259 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC100847.1-201ENST00000611316 481 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 MIR6839-201ENST00000620425 113 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL122126.1-201ENST00000546905 1318 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 MIR670-201ENST00000390142 98 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RPL32P23-201ENST00000397237 405 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RPL23AP56-201ENST00000460778 453 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 CREM-220ENST00000463314 964 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC091167.1-201ENST00000492017 396 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL133243.3-201ENST00000617415 3004 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RNU1-132P-201ENST00000364300 164 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 MIR129-1-201ENST00000384972 72 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC009480.2-201ENST00000422916 432 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC097523.2-201ENST00000435551 652 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC023424.1-201ENST00000496058 459 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC069200.1-201ENST00000609511 323 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL121890.3-201ENST00000618494 516 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC005618.4-201ENST00000625053 554 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 SDAD1P1-202ENST00000524156 2051 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RN7SKP177-201ENST00000410567 355 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RPS3AP54-201ENST00000435535 734 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 SNORA74D-201ENST00000516404 141 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 IGLVIV-65-201ENST00000517313 360 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL121932.1-201ENST00000605542 214 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL035461.2-201ENST00000619201 524 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms