Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.71□□□□□ -1.49
CCDC33Q8N5R6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC33Q8N5R6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.71□□□□□ -1.49
CCDC33Q8N5R6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC33Q8N5R6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC33Q8N5R6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 RNU6-543P-201ENST00000362576 108 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 U3.28-201ENST00000391249 210 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 SLC35E1P1-201ENST00000419313 864 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 FTH1P16-201ENST00000435241 552 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 RPL7P29-201ENST00000437151 728 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 ARL5AP2-201ENST00000444698 533 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AL596266.1-201ENST00000448132 400 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC079841.1-201ENST00000481228 950 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC034205.1-201ENST00000520621 638 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC018442.3-201ENST00000523025 183 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 PMS2P3-207ENST00000529061 717 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 OR5AM1P-201ENST00000532136 1032 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AL049779.2-201ENST00000553847 315 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC027104.1-201ENST00000563702 681 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 ATP5F1P7-201ENST00000567330 760 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 MTCO2P2-201ENST00000591258 225 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AL160237.3-201ENST00000604114 1013 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC073387.2-201ENST00000604797 784 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 NANOGP3-201ENST00000605855 286 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 MIR6133-201ENST00000617057 108 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC104985.3-201ENST00000623479 597 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AC139713.2-210ENST00000641741 992 ntBASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CCDC33Q8N5R6 MAPK10-338ENST00000641647 3362 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 SEC63P2-201ENST00000503863 1939 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC007938.2-201ENST00000604666 2634 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC093849.1-201ENST00000563631 2209 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 RNU6-236P-201ENST00000363886 106 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 SNORA70.6-201ENST00000383934 134 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 RNU6-225P-201ENST00000384613 103 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 LINC01881-201ENST00000416103 412 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AL050341.1-201ENST00000447743 313 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 OTX2P1-201ENST00000450956 354 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 RPS3AP53-201ENST00000454716 778 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 PSAT1P4-201ENST00000466500 526 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 RPL7P40-201ENST00000481703 745 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 RPL15P21-201ENST00000495592 567 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 RNU6-1028P-201ENST00000517164 93 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 IGKV2D-10-201ENST00000520194 281 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 OR8I1P-201ENST00000529291 931 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AGGF1P5-201ENST00000567900 919 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC022884.3-201ENST00000579571 248 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC012616.1-201ENST00000600294 197 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AC024940.4-201ENST00000605507 246 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms