Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MRPS33P2-201ENST00000507850 322 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 RPS27AP18-201ENST00000515536 459 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 MIR3176-201ENST00000582210 90 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC006116.3-201ENST00000592968 361 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC124856.1-201ENST00000600819 896 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AL713998.2-201ENST00000604538 1198 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC005086.4-201ENST00000623065 213 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AL672167.2-201ENST00000377164 879 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AP002530.1-201ENST00000405705 684 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 RN7SKP273-201ENST00000411392 314 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 GTF2IP5-201ENST00000414608 731 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 VN1R31P-201ENST00000417498 730 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 RPL12P43-201ENST00000420608 499 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AC092647.3-201ENST00000443044 633 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 SNORD116-30-201ENST00000516468 85 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 RN7SKP147-201ENST00000517154 244 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AC093249.4-201ENST00000564755 259 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AC010615.3-201ENST00000597319 394 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 SUMO2P15-201ENST00000604285 278 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AL121932.1-201ENST00000605542 214 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AL159169.2-201ENST00000610061 1269 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AC067931.1-201ENST00000624190 671 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 LINC01739-205ENST00000641890 573 ntBASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC50Q8IVM0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC50Q8IVM0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC50Q8IVM0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 VN2R3P-201ENST00000422626 1412 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 EOGT-210ENST00000615922 1931 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC50Q8IVM0 RNU1-83P-201ENST00000363426 164 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC50Q8IVM0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 ATP5F1P2-201ENST00000398143 760 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 RN7SKP229-201ENST00000410465 302 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 SNRPFP2-201ENST00000440710 251 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 MTCYBP14-201ENST00000457471 715 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 RPL23AP56-201ENST00000460778 453 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC005532.2-201ENST00000467154 373 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC006967.1-201ENST00000467608 589 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC104971.1-201ENST00000495117 578 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC025445.1-201ENST00000502728 300 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AP005901.4-201ENST00000577336 569 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5□□□□□ -1.61
CCDC50Q8IVM0 AL121612.2-201ENST00000612261 482 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 AL590763.1-201ENST00000398297 1545 ntBASIC5□□□□□ -1.61
CCDC50Q8IVM0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms