Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC092447.2-201ENST00000435487 669 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 RPL10P17-201ENST00000453852 316 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 TVP23BP2-201ENST00000455082 615 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC098976.1-201ENST00000513014 541 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC118942.1-201ENST00000529674 1035 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC018754.1-201ENST00000607486 925 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC025574.2-201ENST00000615621 514 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AL121890.2-201ENST00000617644 465 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 U6.48-201ENST00000618523 106 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 MIR193BHG-214ENST00000641765 509 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC083843.3-201ENST00000623679 2186 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 OR55B1P-203ENST00000641518 2602 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC000374.1-201ENST00000434698 1745 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC100871.1-201ENST00000507871 1456 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC114786.1-201ENST00000512892 1415 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC38Q502W7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 RNA5SP435-201ENST00000364044 108 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 SNORD65C-201ENST00000390962 71 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AL359643.1-201ENST00000404109 423 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC092745.2-202ENST00000411880 369 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 RPL7AP49-201ENST00000429522 581 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AL591438.1-201ENST00000433508 581 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AL031663.1-201ENST00000437445 219 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC016772.1-201ENST00000444170 1261 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC005297.1-201ENST00000444765 862 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 EEF1B2P6-201ENST00000445713 673 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC068135.1-201ENST00000446164 246 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AL445665.1-202ENST00000452436 324 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC245028.2-201ENST00000458673 253 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AP000942.1-201ENST00000463969 747 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 EIF1P7-201ENST00000487533 337 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC38Q502W7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 HMGN1P9-201ENST00000515212 298 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC079600.1-201ENST00000550326 297 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC084759.1-201ENST00000561168 290 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 VN1R84P-201ENST00000593697 235 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC100767.2-201ENST00000604840 693 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC026979.4-201ENST00000606555 645 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 AC008691.1-209ENST00000642094 814 ntBASIC5.59□□□□□ -1.51
CCDC38Q502W7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC38Q502W7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC38Q502W7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC38Q502W7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
CCDC38Q502W7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms