Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX4Q06945 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.66□□□□□ -1.34
SOX4Q06945 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.66□□□□□ -1.34
SOX4Q06945 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.66□□□□□ -1.34
SOX4Q06945 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX4Q06945 AP001541.1-201ENST00000623322 1904 ntBASIC6.66□□□□□ -1.34
SOX4Q06945 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX4Q06945 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX4Q06945 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SOX4Q06945 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX4Q06945 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX4Q06945 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SOX4Q06945 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 AC112243.1-201ENST00000623949 3851 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX4Q06945 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX4Q06945 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX4Q06945 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
SOX4Q06945 Y_RNA.38-201ENST00000362617 102 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 RNU6-621P-201ENST00000364752 109 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 Y_RNA.535-201ENST00000384612 99 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 MIR433-201ENST00000384837 93 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 MT-TL1-201ENST00000386347 75 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AC007068.1-201ENST00000396690 844 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 CYCSP45-201ENST00000402289 315 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 RNU6-575P-201ENST00000411326 105 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 OR5W1P-201ENST00000423705 938 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 RPL12P11-201ENST00000439970 501 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 RPS4XP12-201ENST00000461747 709 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 PSAT1P4-201ENST00000466500 526 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AC098847.1-201ENST00000473094 348 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 RPS7P6-201ENST00000485777 579 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AC025458.1-201ENST00000506046 166 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SOX4Q06945 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX4Q06945 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 TRIM51DP-201ENST00000529746 596 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
SOX4Q06945 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX4Q06945 AC068020.1-201ENST00000594215 661 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
SOX4Q06945 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 AC130352.1-201ENST00000602979 661 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AC008555.7-201ENST00000605008 583 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 PART1_1.1-201ENST00000611761 217 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AL353726.1-201ENST00000614041 1000 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AP004607.9-201ENST00000618202 316 ntBASIC6.65□□□□□ -1.34
SOX4Q06945 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX4Q06945 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX4Q06945 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX4Q06945 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SOX4Q06945 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SOX4Q06945 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SOX4Q06945 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.65□□□□□ -1.35
SOX4Q06945 RBMY1HP-201ENST00000382759 1389 ntBASIC6.65□□□□□ -1.35
SOX4Q06945 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.65□□□□□ -1.35
SOX4Q06945 AC024651.2-201ENST00000562480 2098 ntBASIC6.65□□□□□ -1.35
SOX4Q06945 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
SOX4Q06945 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.65□□□□□ -1.35
SOX4Q06945 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.65□□□□□ -1.35
SOX4Q06945 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SOX4Q06945 CR383658.2-201ENST00000547576 1525 ntBASIC6.65□□□□□ -1.35
SOX4Q06945 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.65□□□□□ -1.35
SOX4Q06945 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.65□□□□□ -1.35
SOX4Q06945 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SOX4Q06945 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
SOX4Q06945 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SOX4Q06945 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 NBPF8-201ENST00000583271 5330 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 SEC63P2-201ENST00000503863 1939 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 RAD17P2-201ENST00000451754 1977 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 AC024587.1-201ENST00000505925 2157 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 RNU6-374P-201ENST00000364146 108 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 Y_RNA.302-201ENST00000364997 102 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms