Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX1P83916 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX1P83916 RN7SL741P-201ENST00000482473 289 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC008410.1-201ENST00000483777 339 ntBASIC4.89□□□□□ -1.63
CBX1P83916 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX1P83916 OR5H7P-201ENST00000514084 930 ntBASIC4.89□□□□□ -1.63
CBX1P83916 HSD3BP3-201ENST00000514706 994 ntBASIC4.89□□□□□ -1.63
CBX1P83916 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.89□□□□□ -1.63
CBX1P83916 RNU6-709P-201ENST00000517257 104 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC008676.3-201ENST00000521237 435 ntBASIC4.89□□□□□ -1.63
CBX1P83916 BUD31P1-201ENST00000521828 359 ntBASIC4.89□□□□□ -1.63
CBX1P83916 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX1P83916 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX1P83916 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.89□□□□□ -1.63
CBX1P83916 AC079905.1-201ENST00000549280 475 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX1P83916 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.89□□□□□ -1.63
CBX1P83916 CYCSP38-201ENST00000559840 322 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX1P83916 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.89□□□□□ -1.63
CBX1P83916 AL138895.2-201ENST00000603019 178 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC008966.2-201ENST00000606157 453 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX1P83916 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX1P83916 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX1P83916 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.89□□□□□ -1.63
CBX1P83916 AC111152.1-202ENST00000635848 339 ntBASIC4.89□□□□□ -1.63
CBX1P83916 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX1P83916 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 A2MP1-204ENST00000566278 4130 ntBASIC4.89□□□□□ -1.63
CBX1P83916 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 AC027290.2-201ENST00000623210 18662 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 NXF4-202ENST00000416098 1465 ntBASIC4.88□□□□□ -1.63
CBX1P83916 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.88□□□□□ -1.63
CBX1P83916 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX1P83916 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX1P83916 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX1P83916 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX1P83916 AC099535.1-201ENST00000408928 371 ntBASIC4.88□□□□□ -1.63
CBX1P83916 RNA5SP345-201ENST00000410646 108 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AL133173.1-201ENST00000423458 397 ntBASIC4.88□□□□□ -1.63
CBX1P83916 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.88□□□□□ -1.63
CBX1P83916 RPL21P91-201ENST00000429231 479 ntBASIC4.88□□□□□ -1.63
CBX1P83916 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CBX1P83916 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 AC005297.1-201ENST00000444765 862 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX1P83916 AL450996.1-201ENST00000445574 1202 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AL445665.1-202ENST00000452436 324 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX1P83916 RN7SL170P-201ENST00000487098 295 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX1P83916 AL592156.1-201ENST00000508758 304 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC109481.1-201ENST00000509173 282 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC011411.1-201ENST00000509592 876 ntBASIC4.88□□□□□ -1.63
CBX1P83916 PARP4P3-201ENST00000510265 317 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC114781.3-201ENST00000512083 142 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX1P83916 RN7SKP99-201ENST00000517028 307 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC012400.1-201ENST00000518452 381 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC027369.2-201ENST00000528030 440 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC078878.1-201ENST00000539832 958 ntBASIC4.88□□□□□ -1.63
CBX1P83916 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX1P83916 AC026826.3-201ENST00000561747 158 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC124068.1-201ENST00000563131 678 ntBASIC4.88□□□□□ -1.63
CBX1P83916 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX1P83916 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX1P83916 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX1P83916 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX1P83916 AC087783.2-201ENST00000605070 562 ntBASIC4.88□□□□□ -1.63
CBX1P83916 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.88□□□□□ -1.63
CBX1P83916 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX1P83916 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX1P83916 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX1P83916 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX1P83916 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CBX1P83916 AC114786.1-201ENST00000512892 1415 ntBASIC4.88□□□□□ -1.63
CBX1P83916 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX1P83916 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CBX1P83916 AC008725.1-201ENST00000605123 2263 ntBASIC4.88□□□□□ -1.63
CBX1P83916 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
CBX1P83916 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 RNU6-386P-201ENST00000362650 107 ntBASIC4.87□□□□□ -1.63
CBX1P83916 RNU4-7P-201ENST00000364758 141 ntBASIC4.87□□□□□ -1.63
CBX1P83916 HMGB1P20-201ENST00000402555 677 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AL357515.1-201ENST00000402967 542 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AL136131.1-201ENST00000406079 803 ntBASIC4.87□□□□□ -1.63
CBX1P83916 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.87□□□□□ -1.63
CBX1P83916 VN1R37P-201ENST00000419096 748 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms