Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.05□□□□□ -1.44
RIPK4P57078 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.05□□□□□ -1.44
RIPK4P57078 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK4P57078 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK4P57078 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RIPK4P57078 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RIPK4P57078 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.05□□□□□ -1.44
RIPK4P57078 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.05□□□□□ -1.44
RIPK4P57078 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK4P57078 AL672167.1-205ENST00000641112 3080 ntBASIC6.05□□□□□ -1.44
RIPK4P57078 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.04□□□□□ -1.44
RIPK4P57078 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.04□□□□□ -1.44
RIPK4P57078 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RIPK4P57078 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK4P57078 SNORA71.2-201ENST00000364941 134 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 RN7SKP216-201ENST00000411050 312 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 Y_RNA.625-201ENST00000411256 107 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 CENPIP1-201ENST00000425713 902 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.04□□□□□ -1.44
RIPK4P57078 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 AK3P4-201ENST00000504283 583 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK4P57078 OR10D4P-201ENST00000525892 951 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK4P57078 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.04□□□□□ -1.44
RIPK4P57078 AC015912.2-201ENST00000571053 181 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 AC241377.1-201ENST00000619797 406 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.04□□□□□ -1.44
RIPK4P57078 AL049536.1-201ENST00000625043 744 ntBASIC6.04□□□□□ -1.44
RIPK4P57078 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
RIPK4P57078 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
RIPK4P57078 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.04□□□□□ -1.44
RIPK4P57078 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RIPK4P57078 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK4P57078 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.03□□□□□ -1.44
RIPK4P57078 AL031595.2-201ENST00000624215 19071 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RIPK4P57078 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIPK4P57078 OR1F12-201ENST00000402365 945 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 RPS4XP9-201ENST00000405151 780 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 UQCRBP1-201ENST00000421129 336 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.03□□□□□ -1.44
RIPK4P57078 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 UBE2V2P4-201ENST00000447495 259 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.03□□□□□ -1.44
RIPK4P57078 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.03□□□□□ -1.44
RIPK4P57078 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
RIPK4P57078 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.03□□□□□ -1.44
RIPK4P57078 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.03□□□□□ -1.44
RIPK4P57078 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
RIPK4P57078 AC069061.3-201ENST00000582254 823 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 AC020915.5-201ENST00000596836 964 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 AC005520.3-201ENST00000602874 370 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 AC005229.3-201ENST00000603438 323 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 AC093765.1-201ENST00000603758 881 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.03□□□□□ -1.44
RIPK4P57078 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.03□□□□□ -1.44
RIPK4P57078 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.03□□□□□ -1.44
RIPK4P57078 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RIPK4P57078 AL355852.1-201ENST00000454081 1771 ntBASIC6.03□□□□□ -1.44
RIPK4P57078 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIPK4P57078 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RIPK4P57078 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.03□□□□□ -1.44
RIPK4P57078 BBX-203ENST00000402543 3980 ntTSL 5 BASIC6.02□□□□□ -1.45
RIPK4P57078 XKRY2-202ENST00000623874 1581 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 XKRY-202ENST00000624960 1581 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 OR51C1P-202ENST00000641159 1444 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.02□□□□□ -1.45
RIPK4P57078 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
RIPK4P57078 OR56B2P-201ENST00000317102 954 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 RNU4-44P-201ENST00000363050 141 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 RNU1-32P-201ENST00000363937 159 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 AL807761.1-201ENST00000417622 171 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.02□□□□□ -1.45
RIPK4P57078 AC006463.2-201ENST00000473326 348 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 AC017007.3-201ENST00000479865 435 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 ARL4AP1-201ENST00000503220 705 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 AC138938.1-201ENST00000515431 782 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.02□□□□□ -1.45
RIPK4P57078 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RIPK4P57078 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.02□□□□□ -1.45
RIPK4P57078 AC084783.1-201ENST00000565846 910 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.02□□□□□ -1.45
RIPK4P57078 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RIPK4P57078 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RIPK4P57078 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.02□□□□□ -1.45
RIPK4P57078 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.02□□□□□ -1.45
RIPK4P57078 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC6.02□□□□□ -1.45
RIPK4P57078 AL592148.3-201ENST00000608771 2646 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 AL513548.1-201ENST00000562904 1724 ntBASIC6.02□□□□□ -1.45
RIPK4P57078 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms