Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 RNU4-31P-201ENST00000384211 141 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 SNORA67-201ENST00000384423 137 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 HSPA8P15-201ENST00000401676 786 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 MTATP6P31-201ENST00000406985 692 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 MIR1271-201ENST00000408537 86 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AL445183.3-201ENST00000414168 502 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 UBE2V1P9-201ENST00000414760 368 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC241520.1-201ENST00000422654 1099 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC108075.1-201ENST00000424692 529 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN20P56880 FO393414.1-201ENST00000428697 1184 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 AL035458.1-201ENST00000433096 585 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 RPL19P16-201ENST00000433839 588 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 OR52B5P-201ENST00000435337 951 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN20P56880 AL606517.1-201ENST00000446914 387 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC104634.1-201ENST00000452720 462 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 RN7SL172P-201ENST00000460535 303 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC021205.1-201ENST00000468797 348 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 RPL21P18-201ENST00000469899 480 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 RPS21P4-201ENST00000487122 248 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC108729.1-201ENST00000487812 947 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 RN7SL30P-201ENST00000488416 306 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 RN7SL346P-201ENST00000491561 294 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN20P56880 HIGD1AP14-201ENST00000507617 282 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN20P56880 RNA5SP92-201ENST00000516437 110 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 RNA5SP373-201ENST00000517271 95 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 CDC42P3-201ENST00000518493 633 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN20P56880 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 YWHABP2-201ENST00000540201 713 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC004825.1-201ENST00000555068 586 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 AC233702.9-201ENST00000581528 203 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC011492.1-201ENST00000600023 315 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC091057.3-201ENST00000602684 733 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC079610.2-201ENST00000604818 690 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC112503.1-201ENST00000608436 391 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AL050303.3-201ENST00000613704 284 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN20P56880 uc_338.7-201ENST00000621834 124 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC074101.1-201ENST00000637861 241 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 OR52B5P-202ENST00000641118 1110 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 AC011493.1-201ENST00000596753 1632 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN20P56880 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN20P56880 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 C4BPAP1-201ENST00000415474 1893 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC019072.1-201ENST00000604535 1551 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 AC234772.1-201ENST00000377927 937 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 MIR105-1-201ENST00000385222 81 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN20P56880 ATF1P1-201ENST00000406040 927 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
CLDN20P56880 AC104333.2-201ENST00000422630 192 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 AL163193.1-201ENST00000444895 788 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 FAR2P1-206ENST00000449736 709 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN20P56880 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 AC107015.1-201ENST00000466902 747 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 RPL7P6-201ENST00000480903 738 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN20P56880 AC072052.1-201ENST00000496556 306 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 GTF2IP9-201ENST00000502460 301 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 TRAV31-201ENST00000502780 342 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 HAUS1P1-201ENST00000505275 832 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC069306.1-201ENST00000507006 843 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms