Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN6P56747 MIR3160-1-201ENST00000577972 85 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN6P56747 AC127024.5-201ENST00000580085 462 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN6P56747 VN1R81P-201ENST00000602085 372 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 AC133552.1-201ENST00000569988 4007 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN6P56747 AC073136.1-201ENST00000449426 2884 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN6P56747 ADAM5-202ENST00000399789 1942 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN6P56747 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CLDN6P56747 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN6P56747 AC011755.1-201ENST00000623763 2049 ntBASIC4.65□□□□□ -1.66
CLDN6P56747 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN6P56747 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN6P56747 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN6P56747 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
CLDN6P56747 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLDN6P56747 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN6P56747 GAPDHP49-201ENST00000421421 961 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLDN6P56747 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN6P56747 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN6P56747 AC016831.4-201ENST00000438302 307 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN6P56747 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN6P56747 ENPP7P11-201ENST00000505915 627 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.65□□□□□ -1.67
CLDN6P56747 AC091868.1-201ENST00000508746 304 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 AC100784.1-201ENST00000522790 310 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLDN6P56747 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN6P56747 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN6P56747 AC022726.1-201ENST00000587475 207 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN6P56747 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN6P56747 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN6P56747 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.65□□□□□ -1.67
CLDN6P56747 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN6P56747 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN6P56747 AC022417.1-201ENST00000624768 1303 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN6P56747 AC063976.2-201ENST00000425667 3556 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN6P56747 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN6P56747 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN6P56747 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN6P56747 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN6P56747 TRIM51GP-201ENST00000534741 1350 ntBASIC4.65□□□□□ -1.67
CLDN6P56747 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CLDN6P56747 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CLDN6P56747 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 AC026523.2-201ENST00000625039 7739 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 AC120338.1-201ENST00000625074 1541 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 LRRC37BP1-201ENST00000398851 714 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 RPL21P67-201ENST00000402896 478 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN6P56747 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN6P56747 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN6P56747 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN6P56747 AL450023.3-201ENST00000440592 271 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 RPL7AP10-201ENST00000481016 791 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 MYL12BP2-201ENST00000503948 512 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.64□□□□□ -1.67
CLDN6P56747 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN6P56747 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 AC021483.2-201ENST00000567415 758 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 AP005119.2-201ENST00000579735 1105 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 RNF138P2-201ENST00000603490 592 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 ARF4P1-201ENST00000605447 541 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 AC004232.3-201ENST00000622977 525 ntBASIC4.64□□□□□ -1.67
CLDN6P56747 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN6P56747 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
CLDN6P56747 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN6P56747 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN6P56747 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN6P56747 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN6P56747 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN6P56747 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN6P56747 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CLDN6P56747 RNU1-82P-201ENST00000390851 165 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 AC025750.1-201ENST00000399891 379 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms