Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TM4SF1P30408 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF1P30408 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF1P30408 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF1P30408 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.95□□□□□ -1.46
TM4SF1P30408 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
TM4SF1P30408 AC125257.1-201ENST00000560400 2930 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.94□□□□□ -1.46
TM4SF1P30408 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.94□□□□□ -1.46
TM4SF1P30408 AL356806.1-201ENST00000422524 916 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AC106901.1-201ENST00000425086 698 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 RPL21P129-201ENST00000491732 478 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AC108157.1-201ENST00000510511 539 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 HMGB1P47-201ENST00000511281 589 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.94□□□□□ -1.46
TM4SF1P30408 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.94□□□□□ -1.46
TM4SF1P30408 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.94□□□□□ -1.46
TM4SF1P30408 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.94□□□□□ -1.46
TM4SF1P30408 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 AC025884.1-201ENST00000556034 378 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AC093249.4-201ENST00000564755 259 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 MTND2P13-201ENST00000577438 1039 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 SNORA74C-1-201ENST00000580726 201 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.94□□□□□ -1.46
TM4SF1P30408 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.94□□□□□ -1.46
TM4SF1P30408 AL445567.2-201ENST00000618935 498 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AL158062.1-201ENST00000619632 745 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AL133370.2-201ENST00000619934 439 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AL023881.1-201ENST00000621088 301 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.94□□□□□ -1.46
TM4SF1P30408 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.94□□□□□ -1.46
TM4SF1P30408 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
TM4SF1P30408 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TM4SF1P30408 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 ZFRP1-201ENST00000457579 2970 ntBASIC5.94□□□□□ -1.46
TM4SF1P30408 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM4SF1P30408 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 MAPK10-304ENST00000641341 3984 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 RNU6-1251P-201ENST00000364502 107 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL672167.2-201ENST00000377164 879 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.93□□□□□ -1.46
TM4SF1P30408 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.93□□□□□ -1.46
TM4SF1P30408 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.93□□□□□ -1.46
TM4SF1P30408 AL358176.3-201ENST00000420757 454 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 RPL7AP25-201ENST00000423357 805 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.93□□□□□ -1.46
TM4SF1P30408 RPS29P17-201ENST00000430795 166 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.93□□□□□ -1.46
TM4SF1P30408 ARL4AP4-201ENST00000434170 518 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 AC079168.2-201ENST00000453977 416 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 RN7SL303P-201ENST00000469773 251 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 RPL36AP41-201ENST00000493820 306 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 RPSAP51-201ENST00000497462 645 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 ENPP7P11-201ENST00000505915 627 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 Y_RNA.719-201ENST00000517156 106 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.93□□□□□ -1.46
TM4SF1P30408 AP000827.1-201ENST00000527814 258 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.93□□□□□ -1.46
TM4SF1P30408 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.93□□□□□ -1.46
TM4SF1P30408 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.93□□□□□ -1.46
TM4SF1P30408 BNIP3P33-201ENST00000598912 569 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL133338.2-201ENST00000604292 736 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AC090948.1-201ENST00000607464 549 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL133243.1-201ENST00000614487 366 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL162574.2-201ENST00000614618 657 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.93□□□□□ -1.46
TM4SF1P30408 RNA5SP196-201ENST00000625967 102 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 ASNSP1-204ENST00000641977 1664 ntBASIC5.93□□□□□ -1.46
TM4SF1P30408 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TM4SF1P30408 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TM4SF1P30408 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms