Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC104966.1-201ENST00000467010 1464 ntBASIC5.31□□□□□ -1.56
EPHA3P29320 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA3P29320 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 AP001284.1-201ENST00000528393 2118 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 COX6B1P3-201ENST00000312310 260 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 OR9K1P-201ENST00000326513 941 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 RNU1-150P-201ENST00000362491 162 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 RNU1-87P-201ENST00000363727 170 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 MIR621-201ENST00000384919 96 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHA3P29320 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
EPHA3P29320 AL136131.1-201ENST00000406079 803 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 SNORA11.5-201ENST00000408163 128 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 RPL12P9-201ENST00000412942 488 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHA3P29320 OR6K4P-201ENST00000423179 955 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHA3P29320 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHA3P29320 HMGB3P24-201ENST00000433260 622 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC007679.3-201ENST00000434035 414 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHA3P29320 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA3P29320 PRPF38AP1-201ENST00000451976 933 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
EPHA3P29320 RPL7P48-201ENST00000461513 746 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AP000797.2-201ENST00000475768 606 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC037198.2-201ENST00000478845 733 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC022215.1-201ENST00000481770 362 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC082651.2-201ENST00000496833 166 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 HPRT1P2-201ENST00000505250 544 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC034244.1-201ENST00000507687 207 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC117522.2-201ENST00000510049 657 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 IMPA1P1-201ENST00000510718 842 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 SNORA3.4-201ENST00000515969 96 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 Y_RNA.667-201ENST00000516212 107 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 AC083923.1-201ENST00000523708 376 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA3P29320 AC027369.5-201ENST00000533838 755 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 AC008083.2-201ENST00000546707 476 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHA3P29320 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA3P29320 AC079905.1-201ENST00000549280 475 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 HMGN2P47-201ENST00000559378 272 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 CYCSP38-201ENST00000559840 322 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AP005403.1-201ENST00000579720 229 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 MIR4271-201ENST00000582451 67 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 MIR548Y-201ENST00000582739 110 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
EPHA3P29320 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHA3P29320 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA3P29320 VN1R74P-201ENST00000613259 503 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC139769.3-201ENST00000618383 175 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 AL591926.1-201ENST00000620542 217 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 MIR6806-201ENST00000622141 64 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AC145207.9-201ENST00000623802 325 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 OR1S1-201ENST00000624470 978 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 AP003399.1-201ENST00000637534 361 ntBASIC5.3□□□□□ -1.56
EPHA3P29320 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA3P29320 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA3P29320 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
EPHA3P29320 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA3P29320 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHA3P29320 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EPHA3P29320 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EPHA3P29320 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.29□□□□□ -1.56
EPHA3P29320 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 LYARP1-201ENST00000436977 1501 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.29□□□□□ -1.56
EPHA3P29320 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
EPHA3P29320 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
EPHA3P29320 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHA3P29320 Y_RNA.169-201ENST00000363745 96 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 RNU6-549P-201ENST00000384433 107 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 MIR320B1-201ENST00000390209 79 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 SNORA48.4-201ENST00000391089 134 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 AC104297.1-201ENST00000393779 870 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
EPHA3P29320 FCF1P5-201ENST00000406490 482 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 AC211486.3-201ENST00000412694 621 ntBASIC5.29□□□□□ -1.56
EPHA3P29320 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.29□□□□□ -1.56
EPHA3P29320 AL022331.1-201ENST00000429025 477 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms