Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 AC006466.1-201ENST00000438721 289 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 EEF1A1P39-201ENST00000440791 250 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.35□□□□□ -1.39
COL6A1P12109 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 CALM1P2-201ENST00000452941 448 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC092754.2-201ENST00000463506 460 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.35□□□□□ -1.39
COL6A1P12109 RPS4XP6-201ENST00000477670 797 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC021087.2-201ENST00000504656 1203 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.35□□□□□ -1.39
COL6A1P12109 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.35□□□□□ -1.39
COL6A1P12109 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.35□□□□□ -1.39
COL6A1P12109 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A1P12109 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.35□□□□□ -1.39
COL6A1P12109 AP001922.4-201ENST00000526967 290 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 OR4A2P-201ENST00000527276 913 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A1P12109 AL391156.1-201ENST00000554965 554 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 OR11J2P-201ENST00000555298 907 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AGGF1P7-201ENST00000562369 913 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 SULT1C2P2-201ENST00000562517 294 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.35□□□□□ -1.39
COL6A1P12109 AC069366.1-201ENST00000583159 838 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.35□□□□□ -1.39
COL6A1P12109 AC068020.1-201ENST00000594215 661 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC130352.1-201ENST00000602979 661 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC095055.1-201ENST00000603472 1113 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 Z95327.3-201ENST00000610385 572 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AL731566.2-201ENST00000618971 317 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.35□□□□□ -1.39
COL6A1P12109 AP002799.1-201ENST00000623552 423 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC021106.3-201ENST00000623925 531 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A1P12109 MIR1322-201ENST00000638013 71 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 AC103706.2-201ENST00000638080 240 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A1P12109 HSPD1P11-201ENST00000508643 1702 ntBASIC6.35□□□□□ -1.39
COL6A1P12109 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.35□□□□□ -1.39
COL6A1P12109 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
COL6A1P12109 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A1P12109 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 AC007382.1-201ENST00000624376 2618 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A1P12109 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
COL6A1P12109 RNA5SP30-201ENST00000365552 115 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A1P12109 GSTA8P-201ENST00000404253 637 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 RAP1BP1-201ENST00000412709 553 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A1P12109 MTND4P3-201ENST00000417829 541 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A1P12109 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A1P12109 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A1P12109 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A1P12109 NPM1P33-201ENST00000438918 872 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A1P12109 UBE2D3P4-201ENST00000441973 436 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A1P12109 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A1P12109 AC104978.1-201ENST00000449387 391 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A1P12109 VDAC2P4-201ENST00000452925 711 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 RPS6P2-201ENST00000454208 705 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 GYG1P1-201ENST00000460864 698 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 AC111000.2-201ENST00000507775 550 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC021146.7-201ENST00000509604 775 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 XKRY-201ENST00000510392 1100 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 IMPA1P1-201ENST00000510718 842 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 RNU6-1129P-201ENST00000515964 104 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 MTCYBP19-201ENST00000517463 1124 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.34□□□□□ -1.39
COL6A1P12109 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A1P12109 AP002373.2-201ENST00000541631 1060 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC006518.2-201ENST00000542513 940 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A1P12109 HSPE1P2-201ENST00000554777 306 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC008015.1-201ENST00000555505 465 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC090888.1-201ENST00000561335 1141 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A1P12109 AC106734.1-201ENST00000568646 663 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC006116.3-201ENST00000592968 361 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.34□□□□□ -1.39
COL6A1P12109 AC000068.2-201ENST00000608816 460 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL6A1P12109 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A1P12109 HSPA8P18-201ENST00000439846 1928 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 AC007159.1-201ENST00000566529 4706 ntBASIC6.34□□□□□ -1.39
COL6A1P12109 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms