Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CXCL1P09341 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CXCL1P09341 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CXCL1P09341 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CXCL1P09341 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CXCL1P09341 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL1P09341 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL1P09341 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL1P09341 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 AC097504.1-201ENST00000515103 2415 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.58□□□□□ -1.84
CXCL1P09341 Z97832.1-201ENST00000402490 328 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 RN7SKP293-201ENST00000411389 296 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.58□□□□□ -1.84
CXCL1P09341 RPS3P2-201ENST00000421346 701 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.58□□□□□ -1.84
CXCL1P09341 TCEA1P1-201ENST00000449716 880 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 OR52E7P-201ENST00000452394 933 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 HSPE1P22-201ENST00000456856 327 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AC084754.1-201ENST00000463466 464 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL1P09341 RN7SL97P-201ENST00000486780 299 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.58□□□□□ -1.84
CXCL1P09341 RN7SL466P-201ENST00000497546 295 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AC083829.1-201ENST00000503756 657 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 PSMA2P2-201ENST00000504319 686 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AK4P6-201ENST00000505168 528 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 SNORD46.2-201ENST00000516021 102 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 MIR2114-201ENST00000516645 80 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL1P09341 OR4A46P-201ENST00000527255 933 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL1P09341 AC027544.3-201ENST00000535082 757 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 PDCD5P1-201ENST00000543528 309 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL1P09341 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.58□□□□□ -1.84
CXCL1P09341 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 QTRT1P1-201ENST00000604344 1078 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AC104695.2-201ENST00000605056 775 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AC012603.1-201ENST00000606424 528 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CXCL1P09341 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 AL450326.2-201ENST00000421913 1962 ntBASIC3.58□□□□□ -1.84
CXCL1P09341 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.58□□□□□ -1.84
CXCL1P09341 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL1P09341 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL1P09341 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 LYPLA1P3-201ENST00000402650 695 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 CDY17P-201ENST00000414121 1282 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC234779.1-201ENST00000425910 285 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 PPIAP17-201ENST00000438507 471 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 HMGN1P36-201ENST00000446623 298 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 HMGB1P16-201ENST00000447155 540 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 AC000111.2-201ENST00000448200 210 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 RPS26P41-201ENST00000450370 284 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC097484.1-201ENST00000471148 389 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 RN7SL547P-201ENST00000490793 290 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 AGGF1P3-201ENST00000493675 1213 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.57□□□□□ -1.84
CXCL1P09341 AL592156.1-201ENST00000508758 304 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.57□□□□□ -1.84
CXCL1P09341 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CXCL1P09341 BUD31P1-201ENST00000521828 359 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CXCL1P09341 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CXCL1P09341 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.57□□□□□ -1.84
CXCL1P09341 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC022404.1-201ENST00000555320 273 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.57□□□□□ -1.84
CXCL1P09341 AP000919.1-201ENST00000582850 985 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 EIF1P5-201ENST00000585002 234 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms