Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A1P02462 RNA5SP49-201ENST00000516450 115 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A1P02462 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A1P02462 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A1P02462 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 AL161729.3-201ENST00000603533 673 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 AC005034.4-201ENST00000603612 899 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 AL160290.3-201ENST00000604869 165 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.41□□□□□ -1.54
COL4A1P02462 AC090506.2-201ENST00000624521 419 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL4A1P02462 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 AL591135.1-201ENST00000401578 5914 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A1P02462 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 MIR3065-201ENST00000390137 79 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 AL080315.1-201ENST00000406055 466 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 AC009506.2-201ENST00000420635 840 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 AL358176.3-201ENST00000420757 454 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A1P02462 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A1P02462 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A1P02462 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A1P02462 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.4□□□□□ -1.54
COL4A1P02462 RN7SL542P-201ENST00000467147 294 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 RPL21P129-201ENST00000491732 478 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 RPS27AP13-201ENST00000498403 237 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A1P02462 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A1P02462 AP001804.2-201ENST00000533932 910 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 ADAD1P2-201ENST00000588476 646 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A1P02462 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A1P02462 AC112200.1-201ENST00000625015 234 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A1P02462 OR8B1P-202ENST00000641132 1178 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 LINC01808-202ENST00000641680 1116 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.4□□□□□ -1.54
COL4A1P02462 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
COL4A1P02462 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL4A1P02462 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL4A1P02462 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A1P02462 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A1P02462 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A1P02462 AL672167.1-203ENST00000641299 2975 ntBASIC5.4□□□□□ -1.54
COL4A1P02462 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A1P02462 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL4A1P02462 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A1P02462 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A1P02462 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A1P02462 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A1P02462 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
COL4A1P02462 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.4□□□□□ -1.55
COL4A1P02462 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
COL4A1P02462 RNA5SP187-201ENST00000384400 119 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 RPS26P8-201ENST00000393490 348 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 RPS20P14-201ENST00000412545 360 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 RPL36AP36-201ENST00000418616 301 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 RPS26P4-201ENST00000431743 355 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 AC012671.1-201ENST00000451912 203 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 RPL23AP2-201ENST00000471227 466 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 RN7SL817P-201ENST00000480777 288 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.4□□□□□ -1.55
COL4A1P02462 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.4□□□□□ -1.55
COL4A1P02462 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
COL4A1P02462 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
COL4A1P02462 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.4□□□□□ -1.55
COL4A1P02462 AC034105.4-201ENST00000568304 277 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 AC006130.2-201ENST00000586202 326 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 AC093227.2-201ENST00000589357 285 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 AC091979.2-201ENST00000607514 214 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 AC008833.1-201ENST00000611633 691 ntBASIC5.4□□□□□ -1.55
COL4A1P02462 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A1P02462 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A1P02462 AL022393.1-201ENST00000625142 1677 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL4A1P02462 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A1P02462 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
COL4A1P02462 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A1P02462 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COL4A1P02462 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A1P02462 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.39□□□□□ -1.55
COL4A1P02462 SNORA11F-201ENST00000408237 128 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 RNA5SP36-201ENST00000410197 133 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 CDY14P-201ENST00000431260 1014 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 CDY12P-201ENST00000440679 1015 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A1P02462 CDY13P-201ENST00000445813 1015 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A1P02462 CDY23P-201ENST00000451661 1014 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 SNORA84-201ENST00000459229 133 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A1P02462 RNA5SP143-201ENST00000516936 115 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms