Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SRRM1P3-201ENST00000426911 2678 ntBASIC4.9□□□□□ -1.63
HLA-DQA2P01906 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 AL442128.2-201ENST00000620246 1824 ntBASIC4.9□□□□□ -1.63
HLA-DQA2P01906 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA2P01906 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC106872.5-201ENST00000508856 1416 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ZNF876P-202ENST00000398732 1485 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 VN1R12P-201ENST00000403778 876 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 PPIAP9-201ENST00000403866 498 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 OR2AT2P-201ENST00000413438 905 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 RPS24P7-201ENST00000416921 246 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC234064.1-201ENST00000436312 247 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 MTCO2P20-201ENST00000437339 673 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 PTENP1-201ENST00000447117 1215 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 MTCYBP11-201ENST00000447254 1109 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 RPS27AP2-201ENST00000457576 465 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC090602.1-201ENST00000469695 252 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC011037.1-201ENST00000483964 558 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC021193.1-201ENST00000511607 420 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 RNA5SP271-201ENST00000516700 88 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 TRIM77BP-201ENST00000524985 1119 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AP001636.2-201ENST00000525517 696 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AL358913.1-201ENST00000554342 121 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC061975.8-201ENST00000587058 721 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC025588.2-201ENST00000604851 466 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AL445423.1-201ENST00000609941 536 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC024257.5-201ENST00000612739 531 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC025574.2-201ENST00000615621 514 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC139769.3-201ENST00000618383 175 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 VN1R7P-201ENST00000619242 903 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 AC015726.3-201ENST00000624501 418 ntBASIC4.89□□□□□ -1.63
HLA-DQA2P01906 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA2P01906 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.88□□□□□ -1.63
HLA-DQA2P01906 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA2P01906 RNU6-549P-201ENST00000384433 107 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms