Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SMAD6O43541 CASC19-281ENST00000642118 1554 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SMAD6O43541 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SMAD6O43541 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.22□□□□□ -1.57
SMAD6O43541 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.22□□□□□ -1.57
SMAD6O43541 RNU6-670P-201ENST00000364312 104 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 RNA5SP455-201ENST00000365190 119 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 RNA5SP187-201ENST00000384400 119 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 TAS2R15P-201ENST00000390674 928 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AL078595.1-201ENST00000404458 226 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.22□□□□□ -1.57
SMAD6O43541 AC092648.1-201ENST00000425870 423 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 MTCYBP31-201ENST00000438855 1122 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 RPL34P20-201ENST00000442771 351 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 OR52Y1P-201ENST00000452418 828 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 CBX1P2-201ENST00000453841 458 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 RN7SL610P-201ENST00000463845 291 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 HMGN2P25-201ENST00000486956 268 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 AC093720.1-201ENST00000505681 714 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 RNU6-1102P-201ENST00000516149 96 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 RNA5SP230-201ENST00000517039 122 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.22□□□□□ -1.57
SMAD6O43541 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 MRPS36P5-201ENST00000551909 298 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 DPRXP4-201ENST00000578053 568 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 MIR4660-201ENST00000583549 74 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 MTCO2P2-201ENST00000591258 225 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.22□□□□□ -1.57
SMAD6O43541 BX323046.1-201ENST00000610145 535 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 AL627230.1-201ENST00000613077 211 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AL591926.8-201ENST00000616876 211 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC026367.3-201ENST00000619032 590 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC097460.3-201ENST00000623099 442 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC139792.2-201ENST00000624218 587 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 CASC19-222ENST00000641321 1173 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 THAP12P4-201ENST00000528321 2266 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 AC002525.1-201ENST00000624392 1622 ntBASIC5.22□□□□□ -1.57
SMAD6O43541 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMAD6O43541 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SMAD6O43541 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SMAD6O43541 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SMAD6O43541 AL022393.1-201ENST00000625142 1677 ntBASIC5.21□□□□□ -1.57
SMAD6O43541 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SMAD6O43541 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SMAD6O43541 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.21□□□□□ -1.57
SMAD6O43541 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SMAD6O43541 SNORA27.3-201ENST00000364937 134 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 SNORD116-2-201ENST00000384274 95 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 SNORD116-6-201ENST00000384711 96 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AL589647.1-201ENST00000402485 466 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 MTCO2P31-201ENST00000402702 684 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 GJA6P-201ENST00000415117 1042 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AL121878.1-201ENST00000418638 859 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AC005005.2-201ENST00000420779 380 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 AL590762.4-201ENST00000425885 253 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMAD6O43541 HSPD1P12-201ENST00000429127 1069 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 RBMY2QP-201ENST00000429799 1147 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 MTND5P25-201ENST00000430499 799 ntBASIC5.21□□□□□ -1.58
SMAD6O43541 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.21□□□□□ -1.58
SMAD6O43541 AL512637.2-201ENST00000431287 1256 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms