Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC108693.1-201ENST00000496068 432 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 NENFP3-201ENST00000503735 313 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC091951.3-201ENST00000504093 246 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 OR5M14P-201ENST00000506803 618 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 OR4A2P-201ENST00000527276 913 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 DUXAP6-201ENST00000553858 601 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC044860.2-201ENST00000561005 179 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AL354943.1-201ENST00000572103 781 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 MTCO1P40-201ENST00000574371 625 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC016839.1-201ENST00000578162 867 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 VN1R83P-201ENST00000595685 445 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF92P3-201ENST00000596594 954 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC124856.1-201ENST00000600819 896 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC021106.3-201ENST00000623925 531 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 C4BPAP1-201ENST00000415474 1893 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC109780.1-201ENST00000451768 1344 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 AC235565.1-201ENST00000456962 1325 ntBASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB1Q9Y5F3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB1Q9Y5F3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB1Q9Y5F3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.71□□□□□ -1.49
PCDHB1Q9Y5F3 BCORP1-203ENST00000513194 5093 ntBASIC5.71□□□□□ -1.49
PCDHB1Q9Y5F3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 RNU6-1339P-201ENST00000363574 91 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 RNU1-136P-201ENST00000384181 164 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 HMGB3P7-201ENST00000400214 611 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AL079342.2-201ENST00000403367 482 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AL356131.1-201ENST00000405826 414 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 SPTLC1P2-201ENST00000407089 121 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AL590084.1-201ENST00000407885 387 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 NANOGP4-201ENST00000427230 913 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 CNOT7P1-201ENST00000429006 852 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AL161722.1-201ENST00000446972 1032 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC005002.1-201ENST00000447458 540 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC233982.1-201ENST00000451247 436 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 RANP1-206ENST00000455094 651 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 ATG12P2-201ENST00000456830 416 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC010468.1-201ENST00000461022 817 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 RPS23P2-201ENST00000463671 415 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 RPS23P6-201ENST00000466136 431 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 PRDX3P4-201ENST00000470828 747 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC037198.2-201ENST00000478845 733 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 UBA52P7-201ENST00000486088 380 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 IGLV3-30-201ENST00000524362 298 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AP002812.4-201ENST00000532139 286 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC005951.1-201ENST00000576706 485 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 EIF1P6-201ENST00000600054 334 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC090525.3-201ENST00000605601 189 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 MIR6798-201ENST00000612887 67 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC000095.2-202ENST00000637415 154 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC087565.3-203ENST00000641018 837 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC073429.2-201ENST00000569694 1444 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 AC232271.1-201ENST00000602455 2715 ntBASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms