Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 NPM1P18-201ENST00000434232 732 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 RPL6P9-201ENST00000466502 859 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 ATP5LP5-201ENST00000483050 299 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 RPS17P5-201ENST00000498293 408 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC093752.1-206ENST00000511823 336 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC119751.5-201ENST00000514077 770 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC139365.2-201ENST00000517972 253 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 IGHV3-63-201ENST00000518422 341 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC079064.1-201ENST00000528365 362 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AGGF1P7-201ENST00000562369 913 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC096996.1-201ENST00000563813 325 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 FKBP1AP1-201ENST00000594588 318 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 VN1R87P-201ENST00000596706 487 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC090607.5-201ENST00000615692 224 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC006386.1-201ENST00000619436 415 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AL158062.1-201ENST00000619632 745 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC004232.3-201ENST00000622977 525 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 MTND2P41-201ENST00000637599 773 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 CASC19-264ENST00000641912 1184 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AL355578.1-201ENST00000607405 1328 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC107021.2-201ENST00000567714 2095 ntBASIC5.38□□□□□ -1.55
VPS4AQ9UN37 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4AQ9UN37 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 RNA5SP326-201ENST00000363209 110 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 RNU4-28P-201ENST00000364739 141 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 RNU4-7P-201ENST00000364758 141 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 SNORA70.6-201ENST00000383934 134 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC005042.1-201ENST00000393397 800 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 OR6E1P-201ENST00000414424 923 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC107081.1-201ENST00000414975 361 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 LINC01347-201ENST00000417964 355 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 HMGB3P24-201ENST00000433260 622 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 MED28P3-201ENST00000444288 531 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 LINC02210-201ENST00000444561 288 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 SEPT7P3-201ENST00000455017 621 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 ABCC13-202ENST00000463099 3842 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 RN7SL570P-201ENST00000484405 292 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 MTCO3P35-201ENST00000485582 781 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 HIGD1AP14-201ENST00000507617 282 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 RNU6-1028P-201ENST00000517164 93 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 CDC42P3-201ENST00000518493 633 ntBASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
VPS4AQ9UN37 MIR4789-201ENST00000577469 82 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms