Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SNORA63.3-201ENST00000362682 132 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 RNA5SP87-201ENST00000384155 118 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AL133270.1-201ENST00000402635 279 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 NPM1P37-201ENST00000403105 874 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 RNF19BPX-201ENST00000426224 625 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 VTI1BP4-201ENST00000427516 527 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC008072.1-201ENST00000434254 824 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 RAB9AP5-201ENST00000437794 597 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 RAB9AP2-201ENST00000443911 597 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC010733.1-201ENST00000451515 401 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AURKAPS2-201ENST00000454983 333 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC063943.1-201ENST00000465434 453 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC092324.1-201ENST00000468671 324 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC113192.3-201ENST00000529152 742 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC005868.1-201ENST00000536421 331 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AL049839.1-201ENST00000556151 657 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC104072.1-201ENST00000568817 668 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 MIR4737-201ENST00000583979 81 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC007497.1-201ENST00000610421 561 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AP001784.1-201ENST00000624107 428 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 CR381572.2-201ENST00000624852 397 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC009452.1-201ENST00000640823 606 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 SNORD51.1-201ENST00000365405 77 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 U3.30-201ENST00000391308 210 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 TRIM60P17-201ENST00000415181 719 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 MTND4P24-201ENST00000424002 397 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AL360081.1-201ENST00000428299 555 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 BTF3P6-201ENST00000448054 499 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 SLC25A18P1-201ENST00000449385 454 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 RBMY2TP-201ENST00000451162 947 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AL645937.3-201ENST00000453647 936 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 EIF2S2P5-201ENST00000457635 968 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC104849.1-201ENST00000462623 405 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 ATP5G1P3-201ENST00000463301 410 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC090602.1-201ENST00000469695 252 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC108729.2-201ENST00000476543 840 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC083982.1-201ENST00000485679 344 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 OR7H2P-201ENST00000513483 306 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 RNU6-1102P-201ENST00000516149 96 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 VTA1P2-201ENST00000520205 911 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 PCNPP1-201ENST00000552501 511 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 MIR4480-201ENST00000582492 71 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AL133247.2-201ENST00000603236 482 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 KATNBL1P5-201ENST00000605015 517 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC135178.6-201ENST00000605314 398 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC009269.6-201ENST00000621778 588 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC079298.2-201ENST00000623885 459 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AL022311.1-201ENST00000623726 19416 ntBASIC5.24□□□□□ -1.57
SIX4Q9UIU6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SIX4Q9UIU6 AC006484.1-201ENST00000435086 1884 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 528.7 ms