Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AC006042.3-201ENST00000454684 1469 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 MIR331-201ENST00000362302 94 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 RPL6P29-201ENST00000414863 865 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AL157831.1-201ENST00000426134 473 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 RPEP2-201ENST00000432149 701 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 RNA5SP246-201ENST00000458909 119 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 RPL7P15-201ENST00000461190 712 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 IFITM8P-201ENST00000522529 394 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AC099669.2-201ENST00000616549 437 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AC068533.1-201ENST00000418542 415 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 NANOGP10-201ENST00000453325 895 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AC099522.1-202ENST00000514718 367 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 SOD1P3-201ENST00000518682 454 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 AC113403.1-201ENST00000604910 193 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 MFSD8-236ENST00000641509 4050 ntBASIC4.64□□□□□ -1.67
CHD7Q9P2D1 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 SNORA70.6-201ENST00000383934 134 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 MIR483-201ENST00000385070 76 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 AC007991.1-201ENST00000522680 631 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 GTF2IP22-201ENST00000554443 182 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 AL449283.1-201ENST00000602631 3403 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 AC107068.1-201ENST00000563286 4218 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 RNU1-14P-201ENST00000362759 152 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 RPL21P43-201ENST00000425440 472 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 CDY14P-201ENST00000431260 1014 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 CDY12P-201ENST00000440679 1015 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 CDY13P-201ENST00000445813 1015 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 CDY23P-201ENST00000451661 1014 ntBASIC4.63□□□□□ -1.67
CHD7Q9P2D1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD7Q9P2D1 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 SNORA73.2-201ENST00000364946 201 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 RNA5SP151-201ENST00000365632 117 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AL035696.2-201ENST00000407941 709 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AL450992.3-201ENST00000413192 568 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC013429.2-201ENST00000418798 781 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC006499.5-201ENST00000505037 514 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 RNA5SP519-201ENST00000516480 119 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AGGF1P9-201ENST00000561884 913 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC109446.4-201ENST00000623235 2755 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms