Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.87□□□□□ -1.63
CISHQ9NSE2 DHX40P1-201ENST00000588725 1412 ntBASIC4.87□□□□□ -1.63
CISHQ9NSE2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 OR4K15-201ENST00000305051 1216 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 RNA5SP505-201ENST00000364748 108 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC069213.2-201ENST00000420238 366 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 RPL21P91-201ENST00000429231 479 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC011753.3-201ENST00000443436 406 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC007686.1-201ENST00000488511 463 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 RNA5SP446-201ENST00000515955 82 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC091178.1-203ENST00000584586 279 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 AL133406.3-201ENST00000606817 541 ntBASIC4.86□□□□□ -1.63
CISHQ9NSE2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.86□□□□□ -1.63
CISHQ9NSE2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CISHQ9NSE2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CISHQ9NSE2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CISHQ9NSE2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC125336.1-201ENST00000508893 2827 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 RNU6-398P-201ENST00000384143 109 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AL121878.1-201ENST00000418638 859 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 RAD23BP1-201ENST00000421404 1227 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 RPS12P10-201ENST00000427031 377 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AL162591.2-201ENST00000449634 317 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 RPS29P22-201ENST00000472363 168 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 OR52A4P-201ENST00000472867 958 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 HMGB2P1-201ENST00000591146 634 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC008966.2-201ENST00000606157 453 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC100847.1-201ENST00000611316 481 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC073342.3-201ENST00000624211 193 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AL049536.1-201ENST00000625043 744 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC073869.7-201ENST00000640874 297 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC005261.6-201ENST00000623072 1387 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 VN2R3P-201ENST00000422626 1412 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC099654.3-201ENST00000447087 1546 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 HSPD1P14-201ENST00000432666 1618 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AP001642.1-201ENST00000624727 2117 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 CPHL1P-201ENST00000461341 3407 ntBASIC4.85□□□□□ -1.63
CISHQ9NSE2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CISHQ9NSE2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CISHQ9NSE2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 PROS2P-201ENST00000474651 1951 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CISHQ9NSE2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 LINC00622-201ENST00000562811 1570 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CISHQ9NSE2 MTCO1P7-201ENST00000419523 1542 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 AC053481.2-202ENST00000582394 1500 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 RNA5SP151-201ENST00000365632 117 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 SNORD96B-201ENST00000386148 79 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 GLULP6-201ENST00000399502 913 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 AC119751.6-201ENST00000416712 186 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 AC092570.3-201ENST00000420113 693 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms