Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPL7L1P13-201ENST00000511702 739 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 RNU6-358P-201ENST00000516564 75 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC107952.1-201ENST00000524200 376 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 OR6M2P-201ENST00000529831 871 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 OR5AL2P-201ENST00000532185 920 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC069240.2-201ENST00000550242 609 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AL132640.2-202ENST00000559732 614 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC091489.2-201ENST00000566263 604 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC024614.1-201ENST00000577546 307 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 MIR5705-201ENST00000579870 89 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 DUXAP4-201ENST00000603046 613 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC097641.3-201ENST00000613523 464 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC005753.1-201ENST00000623837 618 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC120349.2-201ENST00000625002 298 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC092070.2-203ENST00000598377 3644 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC131971.1-201ENST00000332881 1482 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC100871.1-201ENST00000507871 1456 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL355834.1-201ENST00000556602 3965 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 SNORD1C-201ENST00000363315 78 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 RNU5F-7P-201ENST00000363696 115 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 RNU6-185P-201ENST00000384421 107 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 MIR433-201ENST00000384837 93 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 RNU11-201ENST00000387069 134 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 RNU6-780P-201ENST00000391030 104 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSU72Q9NP77 CALM2P3-201ENST00000400429 449 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 FTH1P26-201ENST00000406512 701 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL451061.1-201ENST00000407887 862 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 MIR1284-201ENST00000408337 120 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 SNORA11C-201ENST00000408532 129 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 RPL7P29-201ENST00000437151 728 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 MTND6P5-201ENST00000448266 512 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 RN7SL314P-201ENST00000490735 292 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 RN7SL445P-201ENST00000495609 293 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 RPL19P11-201ENST00000495944 589 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC019235.1-201ENST00000503847 207 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 CARSP2-201ENST00000520688 277 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 OR5AQ1P-201ENST00000527596 927 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AP002812.4-201ENST00000532139 286 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AK6P1-201ENST00000540219 478 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 MIR4262-201ENST00000578394 54 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC015674.1-201ENST00000578482 267 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.34□□□□□ -1.39
SSU72Q9NP77 AC063977.5-201ENST00000601044 974 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL360012.1-201ENST00000602813 131 ntBASIC6.34□□□□□ -1.39
SSU72Q9NP77 AL161729.4-201ENST00000604650 476 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms