Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC084754.1-201ENST00000463466 464 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC021205.1-201ENST00000468797 348 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 MTND2P14-201ENST00000482139 351 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 SUMO2P4-201ENST00000504193 276 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC091435.1-201ENST00000505442 584 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 OR5H7P-201ENST00000514084 930 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 RNA5SP340-201ENST00000517132 107 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC091078.2-201ENST00000557145 559 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AL390726.5-202ENST00000564800 256 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AP005119.1-201ENST00000580956 292 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC015688.2-201ENST00000584523 262 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AL445423.1-201ENST00000609941 536 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC009237.15-201ENST00000610252 501 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 MIR6862-1-201ENST00000613016 70 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 MIR6862-2-201ENST00000614755 70 ntBASIC5.21□□□□□ -1.58
SNX18Q96RF0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX18Q96RF0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX18Q96RF0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 MFSD8-239ENST00000641590 2479 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX18Q96RF0 SUGT1P2-201ENST00000379452 992 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 MTCO1P56-201ENST00000401674 224 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 LYPLA1P3-201ENST00000402650 695 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL356131.1-201ENST00000405826 414 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 MFSD13B-201ENST00000420133 1290 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 PRUNEP1-201ENST00000425846 705 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 RPL23AP4-201ENST00000427757 463 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL365396.1-201ENST00000430854 671 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 DEFA9P-201ENST00000433042 285 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 TUBB4BP6-201ENST00000437576 479 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL008629.1-201ENST00000438615 184 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 EXTL2P1-201ENST00000446218 416 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL050341.1-201ENST00000447743 313 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 MTND1P29-201ENST00000448112 647 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 MTND4LP31-201ENST00000514859 294 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 IGLV3-24-201ENST00000517477 197 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC060775.1-201ENST00000518241 520 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 MTND2P26-201ENST00000528255 1029 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 GCSHP4-201ENST00000538792 439 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 NANOGNBP2-201ENST00000544753 553 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL390334.1-201ENST00000556395 450 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 RPA2P1-201ENST00000556557 721 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 RN7SL753P-201ENST00000581238 290 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC090236.2-201ENST00000587933 1101 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL158042.1-201ENST00000605338 460 ntBASIC5.2□□□□□ -1.58
SNX18Q96RF0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX18Q96RF0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms