Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PPIAP17-201ENST00000438507 471 ntBASIC4.91□□□□□ -1.62
CBX1P83916 C1DP3-201ENST00000455013 423 ntBASIC4.91□□□□□ -1.62
CBX1P83916 HMGN1P8-201ENST00000463578 288 ntBASIC4.91□□□□□ -1.62
CBX1P83916 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX1P83916 AC091874.2-201ENST00000505889 720 ntBASIC4.91□□□□□ -1.62
CBX1P83916 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 AC018797.1-201ENST00000510791 255 ntBASIC4.91□□□□□ -1.62
CBX1P83916 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX1P83916 RNA5SP373-201ENST00000517271 95 ntBASIC4.91□□□□□ -1.62
CBX1P83916 NPM1P6-201ENST00000521088 871 ntBASIC4.91□□□□□ -1.62
CBX1P83916 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX1P83916 AC109635.6-201ENST00000525487 1113 ntBASIC4.91□□□□□ -1.62
CBX1P83916 AC015911.5-201ENST00000587076 451 ntBASIC4.91□□□□□ -1.62
CBX1P83916 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX1P83916 AC060766.1-201ENST00000590824 627 ntBASIC4.91□□□□□ -1.62
CBX1P83916 AC009303.3-201ENST00000591103 736 ntBASIC4.91□□□□□ -1.62
CBX1P83916 AC008536.1-201ENST00000602872 669 ntBASIC4.91□□□□□ -1.62
CBX1P83916 AL590410.1-201ENST00000617925 333 ntBASIC4.91□□□□□ -1.62
CBX1P83916 AC073593.1-201ENST00000624500 411 ntBASIC4.91□□□□□ -1.62
CBX1P83916 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.91□□□□□ -1.62
CBX1P83916 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CBX1P83916 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CBX1P83916 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CBX1P83916 HSPA8P17-201ENST00000427029 1382 ntBASIC4.91□□□□□ -1.62
CBX1P83916 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CBX1P83916 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CBX1P83916 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CBX1P83916 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CBX1P83916 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CBX1P83916 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CBX1P83916 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CBX1P83916 RNU1-15P-201ENST00000353977 144 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX1P83916 RNA5SP477-201ENST00000362639 119 ntBASIC4.9□□□□□ -1.63
CBX1P83916 RNA5SP22-201ENST00000365393 109 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC004386.1-201ENST00000393214 761 ntBASIC4.9□□□□□ -1.63
CBX1P83916 OR7E101P-201ENST00000400428 513 ntBASIC4.9□□□□□ -1.63
CBX1P83916 SNORA77-201ENST00000408716 125 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.9□□□□□ -1.63
CBX1P83916 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX1P83916 AC073335.1-201ENST00000427776 363 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AL392003.1-201ENST00000434394 243 ntBASIC4.9□□□□□ -1.63
CBX1P83916 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CBX1P83916 AC239809.1-201ENST00000450470 217 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AL356390.1-201ENST00000455684 397 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AL133244.1-201ENST00000456007 258 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.9□□□□□ -1.63
CBX1P83916 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.9□□□□□ -1.63
CBX1P83916 AC147055.1-201ENST00000509261 750 ntBASIC4.9□□□□□ -1.63
CBX1P83916 RNU6-615P-201ENST00000516065 106 ntBASIC4.9□□□□□ -1.63
CBX1P83916 SNORA70.20-201ENST00000516848 126 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX1P83916 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.9□□□□□ -1.63
CBX1P83916 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.9□□□□□ -1.63
CBX1P83916 AL360157.1-201ENST00000565962 87 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.9□□□□□ -1.63
CBX1P83916 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.9□□□□□ -1.63
CBX1P83916 NPM1P45-201ENST00000583151 559 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC079315.1-201ENST00000602952 623 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC107905.1-201ENST00000616204 426 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AL049794.2-201ENST00000616301 365 ntBASIC4.9□□□□□ -1.63
CBX1P83916 MIR6071-201ENST00000616741 78 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC105105.5-201ENST00000622635 1294 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AC129778.1-202ENST00000623812 261 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AL591379.1-207ENST00000635982 261 ntBASIC4.9□□□□□ -1.63
CBX1P83916 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.9□□□□□ -1.63
CBX1P83916 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CBX1P83916 AL355852.1-201ENST00000454081 1771 ntBASIC4.9□□□□□ -1.63
CBX1P83916 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CBX1P83916 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CBX1P83916 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CBX1P83916 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX1P83916 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 AC093311.1-201ENST00000506586 2021 ntBASIC4.89□□□□□ -1.63
CBX1P83916 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CBX1P83916 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CBX1P83916 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX1P83916 AL356489.2-201ENST00000566968 3528 ntBASIC4.89□□□□□ -1.63
CBX1P83916 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CBX1P83916 RN7SKP113-201ENST00000363891 295 ntBASIC4.89□□□□□ -1.63
CBX1P83916 RN7SKP187-201ENST00000365536 330 ntBASIC4.89□□□□□ -1.63
CBX1P83916 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 HSPD1P16-201ENST00000402302 394 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC092570.3-201ENST00000420113 693 ntBASIC4.89□□□□□ -1.63
CBX1P83916 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AL035660.1-201ENST00000422041 222 ntBASIC4.89□□□□□ -1.63
CBX1P83916 RPL7P57-201ENST00000423238 740 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC093084.1-201ENST00000424233 687 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CBX1P83916 AC110602.1-201ENST00000437414 318 ntBASIC4.89□□□□□ -1.63
CBX1P83916 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX1P83916 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms