Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.53□□□□□ -1.68
LIM2P55344 AC091685.2-201ENST00000454924 864 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AL445433.1-201ENST00000457507 257 ntBASIC4.53□□□□□ -1.68
LIM2P55344 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.53□□□□□ -1.68
LIM2P55344 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.53□□□□□ -1.68
LIM2P55344 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.53□□□□□ -1.68
LIM2P55344 AC104971.1-201ENST00000495117 578 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.53□□□□□ -1.68
LIM2P55344 FTH1P11-201ENST00000517577 551 ntBASIC4.53□□□□□ -1.68
LIM2P55344 OR7E10P-201ENST00000526420 991 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AP001880.2-201ENST00000538233 448 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.53□□□□□ -1.68
LIM2P55344 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LIM2P55344 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.53□□□□□ -1.68
LIM2P55344 MIR3667-201ENST00000581025 74 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.53□□□□□ -1.68
LIM2P55344 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.53□□□□□ -1.68
LIM2P55344 IMMP1LP1-201ENST00000605170 488 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AC067838.1-201ENST00000606064 577 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AL592494.3-201ENST00000609485 464 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AL158062.1-201ENST00000619632 745 ntBASIC4.53□□□□□ -1.68
LIM2P55344 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.53□□□□□ -1.68
LIM2P55344 DHX9P1-201ENST00000436565 3076 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AL133268.1-201ENST00000405676 1401 ntBASIC4.53□□□□□ -1.68
LIM2P55344 AC125336.1-201ENST00000508893 2827 ntBASIC4.53□□□□□ -1.68
LIM2P55344 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIM2P55344 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
LIM2P55344 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
LIM2P55344 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LIM2P55344 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
LIM2P55344 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.52□□□□□ -1.69
LIM2P55344 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 RNU6-729P-201ENST00000384399 107 ntBASIC4.52□□□□□ -1.69
LIM2P55344 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LIM2P55344 AL607077.1-201ENST00000401718 499 ntBASIC4.52□□□□□ -1.69
LIM2P55344 DHFRP5-201ENST00000406944 564 ntBASIC4.52□□□□□ -1.69
LIM2P55344 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.52□□□□□ -1.69
LIM2P55344 RNU6-564P-201ENST00000410983 104 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.52□□□□□ -1.69
LIM2P55344 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 VN1R37P-201ENST00000419096 748 ntBASIC4.52□□□□□ -1.69
LIM2P55344 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.52□□□□□ -1.69
LIM2P55344 AC013470.3-201ENST00000420252 1194 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC004074.1-201ENST00000421810 1063 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.52□□□□□ -1.69
LIM2P55344 FABP7P2-201ENST00000429946 379 ntBASIC4.52□□□□□ -1.69
LIM2P55344 RPS27P18-201ENST00000431701 247 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.52□□□□□ -1.69
LIM2P55344 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.52□□□□□ -1.69
LIM2P55344 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.52□□□□□ -1.69
LIM2P55344 AL645937.3-201ENST00000453647 936 ntBASIC4.52□□□□□ -1.69
LIM2P55344 CYCSP34-201ENST00000458172 304 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC108751.2-201ENST00000469993 231 ntBASIC4.52□□□□□ -1.69
LIM2P55344 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.52□□□□□ -1.69
LIM2P55344 AC073358.1-201ENST00000505671 684 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC091868.1-201ENST00000508746 304 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.52□□□□□ -1.69
LIM2P55344 RNU1-6P-201ENST00000516290 144 ntBASIC4.52□□□□□ -1.69
LIM2P55344 SEC11B-201ENST00000518383 499 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.52□□□□□ -1.69
LIM2P55344 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.52□□□□□ -1.69
LIM2P55344 OR5D15P-201ENST00000531671 942 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.52□□□□□ -1.69
LIM2P55344 AC087477.6-201ENST00000559595 843 ntBASIC4.52□□□□□ -1.69
LIM2P55344 MIR4737-201ENST00000583979 81 ntBASIC4.52□□□□□ -1.69
LIM2P55344 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.52□□□□□ -1.69
LIM2P55344 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
LIM2P55344 AC097461.1-201ENST00000568928 2821 ntBASIC4.52□□□□□ -1.69
LIM2P55344 SOCS5P3-201ENST00000425115 1576 ntBASIC4.52□□□□□ -1.69
LIM2P55344 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.52□□□□□ -1.69
LIM2P55344 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.52□□□□□ -1.69
LIM2P55344 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LIM2P55344 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIM2P55344 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LIM2P55344 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIM2P55344 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIM2P55344 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIM2P55344 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIM2P55344 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIM2P55344 SDAD1P1-202ENST00000524156 2051 ntBASIC4.51□□□□□ -1.69
LIM2P55344 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LIM2P55344 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.51□□□□□ -1.69
LIM2P55344 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIM2P55344 NRBF2P3-201ENST00000432731 865 ntBASIC4.51□□□□□ -1.69
LIM2P55344 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.51□□□□□ -1.69
LIM2P55344 AC008072.1-201ENST00000434254 824 ntBASIC4.51□□□□□ -1.69
LIM2P55344 NMNAT1P2-201ENST00000435192 860 ntBASIC4.51□□□□□ -1.69
LIM2P55344 RPL12P18-201ENST00000437175 325 ntBASIC4.51□□□□□ -1.69
LIM2P55344 AC004938.1-201ENST00000438468 308 ntBASIC4.51□□□□□ -1.69
LIM2P55344 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.51□□□□□ -1.69
LIM2P55344 MTND6P32-201ENST00000457611 483 ntBASIC4.51□□□□□ -1.69
LIM2P55344 AC092324.1-201ENST00000468671 324 ntBASIC4.51□□□□□ -1.69
LIM2P55344 STRADBP1-201ENST00000478954 1281 ntBASIC4.51□□□□□ -1.69
LIM2P55344 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
LIM2P55344 SCARNA22-201ENST00000503991 125 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms