Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 P2RY10P2-201ENST00000416730 913 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 RNGTTP1-201ENST00000420965 728 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 AC006065.1-201ENST00000422539 802 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 OR10T1P-201ENST00000424327 947 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 AC012519.1-201ENST00000424588 610 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 RPL18P10-201ENST00000425606 538 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
LIMK1P53667 CYCSP42-201ENST00000450823 238 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 SNORD125-201ENST00000459538 96 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 RPL21P6-201ENST00000479171 504 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 NIP7P2-201ENST00000485801 544 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 RNA5SP373-201ENST00000517271 95 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 HMGB1P46-201ENST00000520062 610 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 MTND2P7-201ENST00000521337 640 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.22□□□□□ -1.57
LIMK1P53667 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
LIMK1P53667 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.22□□□□□ -1.57
LIMK1P53667 AC139697.1-201ENST00000548429 745 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 BNIP3P5-201ENST00000562290 498 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LIMK1P53667 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 MAPK10-304ENST00000641341 3984 ntBASIC5.22□□□□□ -1.57
LIMK1P53667 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LIMK1P53667 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
LIMK1P53667 SPATA2P1-201ENST00000431223 2055 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK1P53667 AC104260.2-201ENST00000623551 3497 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK1P53667 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK1P53667 CHEK2P3-201ENST00000416118 248 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 MTATP6P11-201ENST00000428071 670 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.21□□□□□ -1.58
LIMK1P53667 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.21□□□□□ -1.58
LIMK1P53667 MTCYBP29-201ENST00000436327 1006 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 RPL12P46-201ENST00000436610 195 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 AC092013.1-201ENST00000438795 332 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 AC245517.2-201ENST00000442890 346 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 RPL5P13-201ENST00000462840 709 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 RPS7P6-201ENST00000485777 579 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 OR9N1P-202ENST00000494289 481 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
LIMK1P53667 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK1P53667 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK1P53667 OR7H2P-201ENST00000513483 306 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 RN7SKP260-201ENST00000516907 149 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 YWHABP2-201ENST00000540201 713 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK1P53667 AC090312.1-201ENST00000580637 348 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK1P53667 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.21□□□□□ -1.58
LIMK1P53667 AC010503.3-201ENST00000594355 540 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 RNF138P2-201ENST00000603490 592 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK1P53667 AL008729.2-201ENST00000606393 473 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 AC006338.2-201ENST00000616864 791 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK1P53667 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK1P53667 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.21□□□□□ -1.58
LIMK1P53667 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK1P53667 AC007996.1-201ENST00000620414 2821 ntBASIC5.21□□□□□ -1.58
LIMK1P53667 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK1P53667 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK1P53667 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK1P53667 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LIMK1P53667 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.2□□□□□ -1.58
LIMK1P53667 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 MTND4P21-201ENST00000453886 1357 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LIMK1P53667 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms