Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.6□□□□□ -1.67
GTF2A1P52655 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 AL078604.1-201ENST00000404609 466 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.6□□□□□ -1.67
GTF2A1P52655 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.6□□□□□ -1.67
GTF2A1P52655 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
GTF2A1P52655 RN7SKP167-201ENST00000411047 285 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 HMGN1P20-201ENST00000411849 300 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 RPL23AP26-201ENST00000412728 464 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 GABARAPL3-201ENST00000412799 354 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.6□□□□□ -1.67
GTF2A1P52655 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.6□□□□□ -1.67
GTF2A1P52655 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.6□□□□□ -1.67
GTF2A1P52655 AC115285.1-201ENST00000424879 736 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
GTF2A1P52655 CFL1P1-202ENST00000432948 411 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 Z84478.1-201ENST00000438230 1219 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.6□□□□□ -1.67
GTF2A1P52655 GAPDHP25-201ENST00000447061 1001 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC105399.1-202ENST00000447303 205 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC079168.1-201ENST00000458741 345 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC011476.1-201ENST00000466725 307 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC008897.1-201ENST00000494006 347 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 AC109481.1-201ENST00000509173 282 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC011853.1-201ENST00000518911 454 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC026688.1-201ENST00000520639 1168 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.6□□□□□ -1.67
GTF2A1P52655 TRIM77BP-201ENST00000524985 1119 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.6□□□□□ -1.67
GTF2A1P52655 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.6□□□□□ -1.67
GTF2A1P52655 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 AC060766.1-201ENST00000590824 627 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC008814.1-201ENST00000603797 406 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AL499605.1-201ENST00000604628 403 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 AC012603.1-201ENST00000606424 528 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 TNPO1P3-201ENST00000436471 2662 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.6□□□□□ -1.67
GTF2A1P52655 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
GTF2A1P52655 MAPK10-372ENST00000641954 3413 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
GTF2A1P52655 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
GTF2A1P52655 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
GTF2A1P52655 SNORA62.2-201ENST00000364672 152 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 RNU6-1320P-201ENST00000390838 107 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 RNU6-1269P-201ENST00000391139 107 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GTF2A1P52655 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.59□□□□□ -1.67
GTF2A1P52655 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GTF2A1P52655 CENPIP1-201ENST00000425713 902 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AL158073.1-201ENST00000426848 1104 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AC073335.1-201ENST00000427776 363 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AL451142.2-201ENST00000429076 2090 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.59□□□□□ -1.67
GTF2A1P52655 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GTF2A1P52655 AL365396.1-201ENST00000430854 671 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 RPS20P1-201ENST00000434853 354 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AF228730.2-201ENST00000438784 848 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 OR52E7P-201ENST00000452394 933 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GTF2A1P52655 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GTF2A1P52655 RNU6-599P-201ENST00000459383 107 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 RNU6-1193P-201ENST00000459461 107 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.59□□□□□ -1.67
GTF2A1P52655 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
GTF2A1P52655 RN7SL441P-201ENST00000492388 296 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
GTF2A1P52655 AC122718.2-201ENST00000505325 591 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.59□□□□□ -1.67
GTF2A1P52655 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AC006427.1-201ENST00000514359 712 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
GTF2A1P52655 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
GTF2A1P52655 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
GTF2A1P52655 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.59□□□□□ -1.67
GTF2A1P52655 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
GTF2A1P52655 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.59□□□□□ -1.67
GTF2A1P52655 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.59□□□□□ -1.67
GTF2A1P52655 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.59□□□□□ -1.67
GTF2A1P52655 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.59□□□□□ -1.67
GTF2A1P52655 AC017076.1-201ENST00000607613 578 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AC022960.2-201ENST00000616300 666 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AL138721.1-201ENST00000616756 179 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 RNU6-368P-201ENST00000620928 107 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 RNU6-538P-201ENST00000622329 107 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AC073592.6-201ENST00000624271 415 ntBASIC4.59□□□□□ -1.67
GTF2A1P52655 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.59□□□□□ -1.67
GTF2A1P52655 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
GTF2A1P52655 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
GTF2A1P52655 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
GTF2A1P52655 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GTF2A1P52655 EXOC5P1-201ENST00000510543 1969 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms