Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC004453.1-201ENST00000487895 408 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
MRE11P49959 BX510359.5-201ENST00000515651 304 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.46□□□□□ -1.38
MRE11P49959 AC004923.2-201ENST00000529649 369 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 AC010620.1-201ENST00000601088 1102 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC009237.13-201ENST00000603193 276 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC079880.2-201ENST00000603790 1213 ntBASIC6.46□□□□□ -1.38
MRE11P49959 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.46□□□□□ -1.38
MRE11P49959 AP000346.3-201ENST00000622821 210 ntBASIC6.46□□□□□ -1.38
MRE11P49959 AC090617.9-201ENST00000623751 147 ntBASIC6.46□□□□□ -1.38
MRE11P49959 OR13C1P-202ENST00000641378 2919 ntBASIC6.46□□□□□ -1.38
MRE11P49959 BX649567.1-201ENST00000642071 1134 ntBASIC6.46□□□□□ -1.38
MRE11P49959 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MRE11P49959 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MRE11P49959 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.46□□□□□ -1.38
MRE11P49959 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 AL929601.4-201ENST00000613011 1341 ntBASIC6.46□□□□□ -1.38
MRE11P49959 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
MRE11P49959 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
MRE11P49959 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MRE11P49959 AC144833.1-201ENST00000567953 4089 ntBASIC6.45□□□□□ -1.38
MRE11P49959 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
MRE11P49959 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
MRE11P49959 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.45□□□□□ -1.38
MRE11P49959 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 AC099786.3-201ENST00000565735 1410 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC092111.2-201ENST00000611627 1414 ntBASIC6.45□□□□□ -1.38
MRE11P49959 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.45□□□□□ -1.38
MRE11P49959 RNU6-207P-201ENST00000384137 107 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 RPS4XP5-201ENST00000419038 768 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 AL035660.1-201ENST00000422041 222 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 VN1R42P-201ENST00000424651 344 ntBASIC6.45□□□□□ -1.38
MRE11P49959 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.45□□□□□ -1.38
MRE11P49959 OSTCP5-201ENST00000425293 453 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AL590762.4-201ENST00000425885 253 ntBASIC6.45□□□□□ -1.38
MRE11P49959 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 AC023141.3-201ENST00000436698 278 ntBASIC6.45□□□□□ -1.38
MRE11P49959 SUMO2P3-201ENST00000438311 288 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AL606490.1-201ENST00000452266 765 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AL356981.1-201ENST00000454879 684 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 COPS8P2-201ENST00000473228 627 ntBASIC6.45□□□□□ -1.38
MRE11P49959 RPL34P33-201ENST00000486062 334 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC134050.1-201ENST00000495088 933 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC010374.1-201ENST00000503762 1237 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC010486.2-201ENST00000505572 483 ntBASIC6.45□□□□□ -1.38
MRE11P49959 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.45□□□□□ -1.38
MRE11P49959 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 EIF3KP3-201ENST00000514461 639 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.45□□□□□ -1.38
MRE11P49959 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.45□□□□□ -1.38
MRE11P49959 AC010735.1-201ENST00000567305 1026 ntBASIC6.45□□□□□ -1.38
MRE11P49959 GARSP1-201ENST00000570895 719 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.45□□□□□ -1.38
MRE11P49959 AP005262.1-201ENST00000582646 997 ntBASIC6.45□□□□□ -1.38
MRE11P49959 VN1R78P-201ENST00000597393 564 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AC025588.2-201ENST00000604851 466 ntBASIC6.45□□□□□ -1.38
MRE11P49959 RPSAP73-201ENST00000614820 330 ntBASIC6.45□□□□□ -1.38
MRE11P49959 MIR3974-201ENST00000637126 96 ntBASIC6.45□□□□□ -1.38
MRE11P49959 PROS2P-201ENST00000474651 1951 ntBASIC6.45□□□□□ -1.38
MRE11P49959 AL390862.1-201ENST00000635467 1469 ntBASIC6.45□□□□□ -1.38
MRE11P49959 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MRE11P49959 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
MRE11P49959 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 AC007842.1-201ENST00000597336 2039 ntBASIC6.45□□□□□ -1.38
MRE11P49959 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MRE11P49959 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.45□□□□□ -1.38
MRE11P49959 AL731566.1-201ENST00000620490 1937 ntBASIC6.44□□□□□ -1.38
MRE11P49959 AC097063.1-201ENST00000426714 1797 ntBASIC6.44□□□□□ -1.38
MRE11P49959 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 RNU6-697P-201ENST00000363348 107 ntBASIC6.44□□□□□ -1.38
MRE11P49959 OR1L6-202ENST00000373684 1044 ntBASIC6.44□□□□□ -1.38
MRE11P49959 RNA5SP156-201ENST00000410250 110 ntBASIC6.44□□□□□ -1.38
MRE11P49959 AC245060.4-201ENST00000413293 1121 ntBASIC6.44□□□□□ -1.38
MRE11P49959 RPS7P8-201ENST00000418311 581 ntBASIC6.44□□□□□ -1.38
MRE11P49959 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.44□□□□□ -1.38
MRE11P49959 MTND2P18-201ENST00000419962 1030 ntBASIC6.44□□□□□ -1.38
MRE11P49959 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms