Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXA1P49639 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA1P49639 MIR3154-201ENST00000577829 84 ntBASIC4.5□□□□□ -1.69
HOXA1P49639 AC138207.8-204ENST00000579588 527 ntBASIC4.5□□□□□ -1.69
HOXA1P49639 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA1P49639 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA1P49639 Z82195.1-201ENST00000604558 398 ntBASIC4.5□□□□□ -1.69
HOXA1P49639 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA1P49639 MIR6809-201ENST00000612189 116 ntBASIC4.5□□□□□ -1.69
HOXA1P49639 AL669942.2-201ENST00000620352 697 ntBASIC4.5□□□□□ -1.69
HOXA1P49639 AC083865.1-201ENST00000636634 831 ntBASIC4.5□□□□□ -1.69
HOXA1P49639 AC132825.7-201ENST00000638744 335 ntBASIC4.5□□□□□ -1.69
HOXA1P49639 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXA1P49639 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HOXA1P49639 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA1P49639 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA1P49639 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA1P49639 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
HOXA1P49639 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA1P49639 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA1P49639 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXA1P49639 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXA1P49639 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXA1P49639 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HOXA1P49639 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HOXA1P49639 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HOXA1P49639 U6.112-201ENST00000384129 70 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 MIR142-201ENST00000384835 87 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 ANAPC10P1-201ENST00000395991 556 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HOXA1P49639 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 VPS26BP1-201ENST00000417155 755 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXA1P49639 E2F6P2-201ENST00000420708 748 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 OR5M12P-201ENST00000423388 929 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 RIMKLBP2-201ENST00000424737 654 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXA1P49639 MTND2P5-201ENST00000432656 1006 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AL035458.1-201ENST00000433096 585 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC073109.1-201ENST00000445066 978 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 CYCSP24-201ENST00000445119 316 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 EIF2S2P2-201ENST00000447161 982 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AL031313.1-201ENST00000448435 256 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 RBMY2TP-201ENST00000451162 947 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 CALM1P2-201ENST00000452941 448 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC118758.1-202ENST00000454719 225 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC112206.1-201ENST00000468416 477 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 RN7SL649P-201ENST00000496974 275 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC073358.1-201ENST00000505671 684 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 IGHV3-63-201ENST00000518422 341 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC100784.1-201ENST00000522790 310 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 OR10V3P-201ENST00000525712 725 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXA1P49639 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 AC018552.1-201ENST00000562099 811 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC002310.3-201ENST00000569728 723 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXA1P49639 MIR4311-201ENST00000580794 100 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 H3F3BP2-201ENST00000583907 357 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC073387.2-201ENST00000604797 784 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC093424.1-201ENST00000604999 338 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC106052.1-201ENST00000608029 497 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXA1P49639 AC108673.3-201ENST00000609183 335 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AL359091.2-201ENST00000609303 556 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 MIR6793-201ENST00000612376 63 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC037198.3-201ENST00000616754 526 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC009704.2-201ENST00000618739 483 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AL158062.1-201ENST00000619632 745 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC004232.3-201ENST00000622977 525 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC025262.3-201ENST00000623666 360 ntBASIC4.49□□□□□ -1.69
HOXA1P49639 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXA1P49639 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXA1P49639 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXA1P49639 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXA1P49639 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXA1P49639 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms